Gene Dred_1163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1163 
Symbol 
ID4955246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1235315 
End bp1236793 
Gene Length1479 bp 
Protein Length492 aa 
Translation table11 
GC content41% 
IMG OID640180332 
Productstage IV sporulation protein A 
Protein accessionYP_001112522 
Protein GI134299026 
COG category 
COG ID 
TIGRFAM ID[TIGR02836] stage IV sporulation protein A 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.924983 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAGA TGGATATCTT CCGCGATATA GCGGAGAGGA CCGGGGGAGA TATCTACCTC 
GGTGTAGTTG GCGGGGTGCG GACCGGTAAA TCCACTTTTA TTAAAAGATT TATGGAGTTA
GCCGTCATTC CAAATATTAA AAATGTGTAT GATAAAGAAC GGGCTAAGGA TGAACTTCCT
CAGAGCGGTG CAGGACGAAC AATCATGACC ACTGAGCCCA AGTTTGTTCC TAATGAGGCT
ATTGAAATTA CTGTTAACCC TAGCCTTAAG GTAAATATGC GGTTAGTGGA TTGTGTAGGA
TACCGTGTAC TGGGTGCACT GGGATATGAA GAGGAAGAAG GCCCCCGAAT GGTTACAACA
CCATGGTATG AAGAGCCAAT TCCTTTTCAG GAAGCTGCTG AGATTGGTAC CAGAAAAGTT
ATATCCGAAC ATTCCACCAT TGGTGTAGTT GTAACTACCG ATGGGACCAT TACAGATATT
ACTAGAGAGA ATTATATTGA TGCTGAAGAA AGAGTCATAG AAGAGCTAAA AGATATTAAT
AAGCCCTTTA TCCTGCTTCT TAACTCTATC AAACCCCAAG CCAGTGAAAC AATTCAACTG
GCAAATGAAT TAGAAGAAAA ATATGACGTT CCGGTTCTGC CAATTGATTG TGCCGAATTA
AAACAACAGG ATATTCTTAA AATTTTAGAA CAAGTTCTCT TTGAATTCCC AGTTAACGAA
GTTAATATTA GTCTGCCTCT CTGGATCGAG GAACTGGATG GTAAGCACTG GCTCAGAGAA
AGCTTTGAAG ATGCTGTCAA GGATACTGTA CGGCATGTAC GACGTTTACG GGATATTGAA
ACAGCCGTAA GTAACCTTGA TGAGTATGAA TTTGTGCATC AGGTCAACTT AAAACACATG
AATATGGGTA CAGGCTCAGC ATCCATAGAA ATGGTGGCCA AGTCAGACCT TTTCTACCGA
ATATTGACCG AAGAAACTGG TTTTGAAATT GGAGGGGATC ATCATCTTTA TAGACTGATG
AAAGACCTGG CTGTGGCCAA ACGGGAGTTT GATAAGGTAT CCACTGCATT ACAAGAAGTA
CGTGATACAG GCTACGGAGT TGTTACACCG AGACTGGATG AAATGAATCT GGAAGAACCA
GAATTAATTC GTCAAGGCAA TCGTTTTGGG GTAAAATTAA AGGCAAGTGC CCCTTCCCTA
CATGTTATTC GGGCAGATAT AACCACAGAG ATTACACCCA TAATTGGAAC CGAAAAACAA
TGCGAAGAAT TGGTACAATA TATGTTGGCT GGTTTTGACG AGAACCCTCA AAAAATCTGG
GAGTCAGAAA TCTTTGGTAA AACACTACAT GATTTGGTAC GTGAAGGAAT ACAAAATAAA
CTGCACAGAA TGCCGGAAAA TGCCCAAGTT AAATTGCAAG AGACGTTGCA AAGAATTGTT
AACGAAGGCA GTGGCGGTCT AATTTGTATT ATTATATAA
 
Protein sequence
MEKMDIFRDI AERTGGDIYL GVVGGVRTGK STFIKRFMEL AVIPNIKNVY DKERAKDELP 
QSGAGRTIMT TEPKFVPNEA IEITVNPSLK VNMRLVDCVG YRVLGALGYE EEEGPRMVTT
PWYEEPIPFQ EAAEIGTRKV ISEHSTIGVV VTTDGTITDI TRENYIDAEE RVIEELKDIN
KPFILLLNSI KPQASETIQL ANELEEKYDV PVLPIDCAEL KQQDILKILE QVLFEFPVNE
VNISLPLWIE ELDGKHWLRE SFEDAVKDTV RHVRRLRDIE TAVSNLDEYE FVHQVNLKHM
NMGTGSASIE MVAKSDLFYR ILTEETGFEI GGDHHLYRLM KDLAVAKREF DKVSTALQEV
RDTGYGVVTP RLDEMNLEEP ELIRQGNRFG VKLKASAPSL HVIRADITTE ITPIIGTEKQ
CEELVQYMLA GFDENPQKIW ESEIFGKTLH DLVREGIQNK LHRMPENAQV KLQETLQRIV
NEGSGGLICI II