Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_1151 |
Symbol | |
ID | 4955328 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | + |
Start bp | 1221884 |
End bp | 1223173 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640180320 |
Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
Protein accession | YP_001112510 |
Protein GI | 134299014 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.317212 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAACTGG TAATCAACCC TGTAAAAAAA CTACGAGGAA ATGTTTCAGT GCCCGGGGAT AAATCTATAT CACATAGGGC AGTTATGGTT GGGGCTTTAG CCCAGGGAAT CACAGAAGTG AGTAATTTTT TAATGGGGGA AGACTGTCTT GCCACTGTTA AGTGTTTAAG AGCCATGGGA GTATCCATTG AGGGCCCTAC CAATGGCAAG TTAAAGATTT ATGGTGTGGG CTTGCAAGGA CTGCGTGAAC CTGCGGATCT ATTGGATACT GGAAATTCCG GGACAACCAC CCGTTTATTA ATGGGGATTC TTGCCGGTCA ACCCTTTACG AGTATCATTA CTGGGGATCA GTCCCTAAAG AAAAGACCCA TGGCTCGGGT TACTAAACCC CTACAGGATA TGGGAGCTTC CTTTTTAGGC CGAAATCAAA ATAATCTCTT ACCCATGGCT GTTCAAGGCG GCAAGCTAAA ACCCATTGAT TTTCATTCCC CGGTTGCCAG TGCTCAGGTA AAGTCCGCTG TCTTATTTGC AGGGTTATTT GCGGAAGGCT ATACCTCTGT AACGGAACCT GCTGTGTCCA GGGATCATTC TGAACGGATG TTAAAGGCCT TTGGTGCTGA GGTAGAGGTG AAGAATCAAA CTGTTCGAAT AAAGGGGCTC CCCCAACTAA AAGGAATGAA AATCACAGTT CCCGGGGATA TTTCCTCCGC GGCATTTCTC ATGGTTGCAG CGGCAATTCT TCCTGGCTCA GACATAACCA TACAGGGGGT TGGGATCAAT CCAACCCGTG ACGGTATTCT TGAGGTCCTT AAACAAATGG GTGCAGGAAT AGAAATTATG CATAGCCGAT TGCAGGGTGG TGAGCCTGTG GGAGATATTC GGATAAAGGG TGCAGAACTA CAGGGGACTG AGTTATCTGG CCCAATCATA CCTAGACTGA TAGATGAGAT TCCTATTATC GCTGTGGCTG CAGCTTATGC CCGGGGAACT ACAGTAATTC GTGATGCTTC AGAGCTGAAA GTAAAGGAAA GTAACCGTAT CTCCTCAGTG GTAAGGGAAT TAAGGAAGTT TGGTGCAACC GTTGAAGAAC TTTCCGATGG TCTAATCATC CAGGGAGGTA CGCCTTTATC AGGTGCTGTT TGTCAAAGTT ATGGGGACCA CCGGATGGCT ATGGCCATGG CGGTGGCGGG CTTAGCTGCC AGTGGTCAAA CATTAATCGA ACAAGCGGAT TGTATTCCTG TTAGCTTCCC AGGGTTCAGT GATGTATTAA AAGAGGTAAT TGTAGAATAA
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Protein sequence | MELVINPVKK LRGNVSVPGD KSISHRAVMV GALAQGITEV SNFLMGEDCL ATVKCLRAMG VSIEGPTNGK LKIYGVGLQG LREPADLLDT GNSGTTTRLL MGILAGQPFT SIITGDQSLK KRPMARVTKP LQDMGASFLG RNQNNLLPMA VQGGKLKPID FHSPVASAQV KSAVLFAGLF AEGYTSVTEP AVSRDHSERM LKAFGAEVEV KNQTVRIKGL PQLKGMKITV PGDISSAAFL MVAAAILPGS DITIQGVGIN PTRDGILEVL KQMGAGIEIM HSRLQGGEPV GDIRIKGAEL QGTELSGPII PRLIDEIPII AVAAAYARGT TVIRDASELK VKESNRISSV VRELRKFGAT VEELSDGLII QGGTPLSGAV CQSYGDHRMA MAMAVAGLAA SGQTLIEQAD CIPVSFPGFS DVLKEVIVE
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