| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1149 |
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| Symbol | |
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| ID | 4955584 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 1219928 |
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| End bp | 1220944 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640180318 |
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| Product | 3-deoxy-7-phosphoheptulonate synthase |
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| Protein accession | YP_001112508 |
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| Protein GI | 134299012 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2876] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
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| TIGRFAM ID | [TIGR01361] phospho-2-dehydro-3-deoxyheptonate aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00126499 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGTTG TAATGAGCCA GAGAGCTACA GAAGATCATA TAAATGCTGT TTTAAAAAGA
CTTCAAAAAG TCGGTTTTGA AATTCATCTA TCTCAAGGGG TTGAAAGAAC CATTATAGGT
GCTATCGGTG ATAAGACAAG AATGGCTGAT TTGGCACTGG AAGCTATGCC AGAAGTTGAT
AATGTAGTAC CGATACTTCA GCCCTATAAG CTTGCCAGCA GAACCTTTAA AGAAGAAAAC
ACCATCATTC GGGTGGGTGA TTTAGAAATC GGCGGTAATC AAATTCATGT GATGGCTGGG
CCCTGTGCAG TAGAGAGTAG GGAACAGCTT TTTGAGGCCG CGGATGCTGT GAAAAAAGCC
GGAGCGACGC TGCTTAGGGG AGGTGCCTTT AAACCCCGCA CCTCACCCTA TTCCTTTCAA
GGATTAGAAG AAAAAGGATT ACAATATTTA GCCGAGGCGA GGGAAAGAAC TGGGCTTAAA
ATTGTTACAG AGCTTATGGA TGCCAGCAGT TTGCCAATGG TGGCTGAATA TGCAGATATT
ATACAGATAG GCACCCGAAA CATGCAAAAC TTCTTTCTTT TGCGTGCAGT AGCAAATGTA
CAAAAACCTG TACTATTGAA AAGAGGTATT TCAGCCACCA TTGAGGAGTG GTTAATGTCT
GCGGAGTATA TTATGGCCGG GGGAAACTAT CAAGTAATTC TGTGTGAAAG AGGTATCAGA
TCTTACGAGA GCTATACTCG CAACACCTTG GATTTATCTG CTATACCAGT AATAAAGCAT
TTATCTCACC TACCGATTAT TGTGGACCCA AGTCACGCGC TGGGAAAATG GAGATTTGTG
TCTTCCATGT CCAAAGCTGC TGTGGCTGCA GGGGCTGATG GATTATTAAT TGAAGTTCAC
CCTAATCCCT CAGAGGCCTT GTGTGATGGG CCACAATCCT TAACACCGAA TAACTTCGGT
TCCTTAATGA CAGAAGTGCA ACAGGTAGCC GGAGCAGTTG GCAGAACATT GACTTAA
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| Protein sequence | MIVVMSQRAT EDHINAVLKR LQKVGFEIHL SQGVERTIIG AIGDKTRMAD LALEAMPEVD
NVVPILQPYK LASRTFKEEN TIIRVGDLEI GGNQIHVMAG PCAVESREQL FEAADAVKKA
GATLLRGGAF KPRTSPYSFQ GLEEKGLQYL AEARERTGLK IVTELMDASS LPMVAEYADI
IQIGTRNMQN FFLLRAVANV QKPVLLKRGI SATIEEWLMS AEYIMAGGNY QVILCERGIR
SYESYTRNTL DLSAIPVIKH LSHLPIIVDP SHALGKWRFV SSMSKAAVAA GADGLLIEVH
PNPSEALCDG PQSLTPNNFG SLMTEVQQVA GAVGRTLT
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