Gene Dred_1141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1141 
Symbol 
ID4955366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1213820 
End bp1214350 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content45% 
IMG OID640180310 
Productnucleoside recognition domain-containing protein 
Protein accessionYP_001112500 
Protein GI134299004 
COG category[S] Function unknown 
COG ID[COG0700] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACGAAC TGATCAATCA GATTTCACGC TGGGCCATAC CCGTTATGCT TTTATTTATC 
CCATTGCTGG CGTTCATAAA AAAAGTGCCT GTATTTGAAA CATTTGTGGA GGGAGCGGAG
GCAGGTTTTT CAACTGCCAT TAAAACCATT CCATTTTTAA CGGCTATGCT GGTGGCTGTG
AGTATTTTTC GAGCCTCCGG GGCTATGGAG CTTTTAGCTT CTTGGATATC CCCAGTGTTA
AATATGGTGG GGATTCCTGC AGATATTTTA CCCCATGCGG TCATGCGTCC TTTATCAGGT
GGAGCAGCAC TGGGAATTGC CACGGAAATT ATTAAGACCC ACGGACCGGA TAGTTTTGTG
GGTCGCCTTG TTTCGACCAT GCAGGGTAGT AGTGATACAA CCTTTTATGT GCTTACCCTT
TACTTTGGTT CTGTGGGCAT TCGTAAGTAC CGTTATGCAG TGGCATCGGG TTTAACAGCG
GATTTTACCA CGCTTATCGC ATCCATCATG ATTTGTAAGC TAATGTTTTA G
 
Protein sequence
MYELINQISR WAIPVMLLFI PLLAFIKKVP VFETFVEGAE AGFSTAIKTI PFLTAMLVAV 
SIFRASGAME LLASWISPVL NMVGIPADIL PHAVMRPLSG GAALGIATEI IKTHGPDSFV
GRLVSTMQGS SDTTFYVLTL YFGSVGIRKY RYAVASGLTA DFTTLIASIM ICKLMF