Gene Dred_1131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1131 
Symbol 
ID4955926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1203299 
End bp1206022 
Gene Length2724 bp 
Protein Length907 aa 
Translation table11 
GC content44% 
IMG OID640180300 
Productpolynucleotide adenylyltransferase region 
Protein accessionYP_001112490 
Protein GI134298994 
COG category[J] Translation, ribosomal structure and biogenesis
[R] General function prediction only 
COG ID[COG0517] FOG: CBS domain
[COG0617] tRNA nucleotidyltransferase/poly(A) polymerase
[COG0618] Exopolyphosphatase-related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00727527 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGAGATTA TTACAACTCA CGTCAATACA GATTTAGATG GACTGGCCGC AGTGGTGGCA 
GCCCAGAAAC TATATCCCGG GGCTGAGTTG ATTTTTCCCG GGAAATTATC TCGAAACGTT
GAAGAATTTT TGGCACTACA TAAAGACACC CTCAAAAATG TTCGTAGTAT CAAAGATATC
AATATTGACA AAGTTAAACG TATTATAATG GTAGATACCA AAAGCCCTGG ACGAGTTTCA
AAATTAAAAG AGTTATTCAA TCGCCCTGAG GTGGAGGTAC ATATATACGA CCACCATCCA
CGGGCGGAGG GAGATGTTTG TGGTAAGGTC GAAGTCGTTG AAACAGTTGG GGCAGCTACA
ACCCTTCTTA TTGAAAGAAT TCGTGCTAAA GGGTTAGAAA TCACTCCCTT AGAAGCAACC
ATTATGGCCC TGGGAATTTA TGAGGATACT GGCTGTCTGG TCTTTACCAG TACCACTCCA
AGGGATATTC GGGCAGCTGC ATTTCTATTG GAACAAGGGG CAAACCTAGC AGTGGTGGCT
GACTTCTTAG GTCGTCCTTT AACCCAAGAC CAAAAATCCC TGCTCAAAAA ACTTTTGGTT
ACCGCAGAAC ACCATCAAAT TAATGGGACC AAAGTTCTCA TAGCCCGGGG CAATGTGGAT
GAATTTGTAG GGGGATTAGC TTTACTAACC CATAAATTGT CTGAGATTGA GCGCACCGAT
GCAGTTTTTG CTGTGGTGGA GATGGAGGAC CGGGTTCATT TAGTGGGTCG TTGTGCTCTT
AAGGAAGTAA ACTGCAAGGA TATTATGGTC GAATTTGGAG GCGGAGGACA CCCGGCGGCT
GCATCTGCAA CGGTGAAGGG CAAAACCGTA GAGGAAATTG CAGAAAGATT GTTGGAGTTA
GTTAAAGAAA AGATTCATCC CCTGCTAACA GTTAAGGATA TTATGTCAAG TCCTGTGAAA
ATGGTATTTC CTGAAACAAC CATCGAAGAA GCCGGTAAAA TTATGCTCCG TTATGGGCAT
ACAGGTTTAC CAGTTATTAA AGATGGAAAA CTGTCGGGGG TCATTTCCAG GCGGGACGTT
GAAAAAGCTA CCCATCATGG ATTGGGACAT GCTCCGGTAA AGGGTTACAT GACAACAAAT
GTGATAACTG TACAAAAGGA TATGAACATT CATGATGTTC AGGATTTAAT GATAGAAAAG
GATATCGGTA GACTTCCTGT GGTAGAGGGA AATATGGTCA TTGGTATTGT TTCTCGTACC
GATGTATTAC AAACCCTTCA CGAAGGTTTT AAGGGACGGT ATTCTACAAC CTATAACGAA
AAACAAAATG CCAAGACAGC TCATATTCGG CCTGATATGC AGCGGGCATT ACCCAGTCGT
ATCATGAATA TTCTTACGAA GGCCGGTGAG GTAGCTGAAG GATTGAATTA CCAGGTTTAT
GCTGTGGGCG GCTTGGTACG AGATGTATTG CTGAAAGTGG AAAACCTGGA TGTTGATCTG
GTGGTAGAGG GTAACGGTAT TGAAATGGCC AATGAACTGG CCAAGGTCAT CGGGGGAAGG
GTGCGCCCCC ATGAGAAATT TGGTACGGCA GAGATAATAT TTCCGGACGG TTACTGGGTA
GATGTCGTTA CCGCCAGGGT GGAATATTAT GAGTACCCTG CTGCCCTGCC ACAGGTCGAA
CAATCCTCCT TGAAGCATGA TCTCTACCGA AGAGATTTCA CCATTAATGC TATGGCTGTG
GCTTTAAATC CGGAACGATT CGGAGAATTA GTAGATTATT TCAATGGTAG AGAAGATCTG
CAAAATGGAG CCATTCGAGT CTTACATAAT CTGAGTTTTA TTGAAGATCC TACTCGCATC
CTTAGGGCGA TTCGATTTGA ACAACGATAT GACATGGATA TTGAACCCCA AACCCTGCGT
TTAATTAAAG AGGCTGTCCG AGAAAAAGTG ATCGCTCGCC TTTCCACTGA ACGGATGTGG
GGGGAACTTA AACATATTCT GGAGGAAGCA GATCCGGAAC ACATGTTGGA CCGGTTGTCG
GAGTTAGGTG TGTGGGATTA TCTGTTCCCG GAAATCACCT TCTGGGAAGT TCAATATGTT
ATCAGTGAAA TTCCCCAGGC ATTGATGATT CTTCGTAACT GGGGATGGGC AGAACCCGCT
GAAAAATGGT TACCTTATTT TCTGTCAATC CTACACCTAA CTGCCCAGGA AACTGCCTAT
ACCATCTGCC AACGCTATAA TTTAGGTCGC AGGCAAACTG AAAAGGTACT GGACACCATT
GCCTATGGCA GAGTTGCCTT GAGAAGATTG TCTGCCACAG AAGAAGTACC TCTTTCGGAA
CTAACAAAGA TTGTCCAAAC TTTGCCCAGA GAAGCTTATC CTATGTTCTT AACCCTACTG
GAAGATAAGA ACGCCATTCG CCGCTTTCGG TTGGTAATGG AATCGGTCAA TAAAAATAAA
CCAACTGTAA ATGGAAAAGA TATTAGGGAT ATGGGTTATC AACCAGGCCC TATGTATCGT
CGGGCCTTGG ACTCGGTTTG GCAAGCTCGA TTAGACGGTA TGGTTCAAAC CCGGGAAGAG
GAATTGGAAT ATATCCGTTC CTTTTTAGAG CATAACAACG CTCCTAAAAT ACAACCGAAG
CAGCCAAAAC CCCCTATGCA AGATAATTGG CTAAAGAGGG GGAGCAAAGG AAAGAAAGCG
AAGGGGACGA AGCCACTTGT TTAA
 
Protein sequence
MEIITTHVNT DLDGLAAVVA AQKLYPGAEL IFPGKLSRNV EEFLALHKDT LKNVRSIKDI 
NIDKVKRIIM VDTKSPGRVS KLKELFNRPE VEVHIYDHHP RAEGDVCGKV EVVETVGAAT
TLLIERIRAK GLEITPLEAT IMALGIYEDT GCLVFTSTTP RDIRAAAFLL EQGANLAVVA
DFLGRPLTQD QKSLLKKLLV TAEHHQINGT KVLIARGNVD EFVGGLALLT HKLSEIERTD
AVFAVVEMED RVHLVGRCAL KEVNCKDIMV EFGGGGHPAA ASATVKGKTV EEIAERLLEL
VKEKIHPLLT VKDIMSSPVK MVFPETTIEE AGKIMLRYGH TGLPVIKDGK LSGVISRRDV
EKATHHGLGH APVKGYMTTN VITVQKDMNI HDVQDLMIEK DIGRLPVVEG NMVIGIVSRT
DVLQTLHEGF KGRYSTTYNE KQNAKTAHIR PDMQRALPSR IMNILTKAGE VAEGLNYQVY
AVGGLVRDVL LKVENLDVDL VVEGNGIEMA NELAKVIGGR VRPHEKFGTA EIIFPDGYWV
DVVTARVEYY EYPAALPQVE QSSLKHDLYR RDFTINAMAV ALNPERFGEL VDYFNGREDL
QNGAIRVLHN LSFIEDPTRI LRAIRFEQRY DMDIEPQTLR LIKEAVREKV IARLSTERMW
GELKHILEEA DPEHMLDRLS ELGVWDYLFP EITFWEVQYV ISEIPQALMI LRNWGWAEPA
EKWLPYFLSI LHLTAQETAY TICQRYNLGR RQTEKVLDTI AYGRVALRRL SATEEVPLSE
LTKIVQTLPR EAYPMFLTLL EDKNAIRRFR LVMESVNKNK PTVNGKDIRD MGYQPGPMYR
RALDSVWQAR LDGMVQTREE ELEYIRSFLE HNNAPKIQPK QPKPPMQDNW LKRGSKGKKA
KGTKPLV