Gene Dred_1123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1123 
Symbol 
ID4955380 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1193952 
End bp1194935 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content46% 
IMG OID640180293 
Productputative CoA-substrate-specific enzyme activase 
Protein accessionYP_001112483 
Protein GI134298987 
COG category[I] Lipid transport and metabolism 
COG ID[COG1924] Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain) 
TIGRFAM ID[TIGR00241] CoA-substrate-specific enzyme activase, putative 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAGGTT ATCTGGGAAT TGATGTTGGC TCCGTTAGTA CAAACATTGT ATTTATGGAT 
GAACAAACCA ATGTCTTAGA AAGCTTGTAT CTCCGTACCA ATGGGCAACC AGTGGCTACG
GTTCAAAAGG GTCTGGGACA AATTAAAGAA AAGCTACCCG CTAAGGTGGT GGTTAGAGGG
GTAGGGACCA CGGGAAGTGG TCGACAACTT ACAGGTATTG TGGTGGGAGC AGATGCAATA
AAAAATGAGA TTACAGCACA CGCAGTTGCT GCGTCTCACC TAGTCCCAGG TGTTCAATCG
GTATTGGAAA TCGGCGGTCA GGACAGTAAA ATTATTATTC TCCGAAATGG TGTTGTTACA
GATTTTGCCA TGAATACGGT TTGTGCTGCG GGGACAGGAA GCTTTCTCGA TCAGCAGGCC
AGCCGGCTAA ATATTGCCAT TGAAGAGTTT GGGGATATTG CACTCCGAGG TTCGACACCT
GTACGTATTG CCGGTCGTTG TGCCGTTTTT GCTGAGTCCG ATATGATTCA TAAACAACAG
ATGGGTTACA ATCTTGACAA TATTTTAGCA GGACTATGTG AAGCCTTAGT AAGAAATTAT
TTAAATAACG TTGGCAAGGG TAAGGAAATT TTAGGCCCAG TGGTCTTTCA GGGCGGCGTT
GCAGCCAATG CTGGAATGAG AAAGGCCTTT GAAAGGGCTC TAGGTCTAGA AGTGCAGATA
CCAAAATACT TTAATGTGAT GGGTGCCGTA GGTGCGGCCA TGCTTGCCAA AGATGCAGTT
TCCAAGGGGG TTCCTACTCA ATTCAAGGGC TTTGGTGTAG CCGATATGGA ATATAAGGCT
GGCAGTTTTG AATGTGATGG TTGTCCTAAT CTTTGTGAAG TAATCGAAAT GGCGGAACAG
GGCAAGATCA TTGCCCGCTG GGGAGATCGC TGTGGTAAGT GGTCCAATGC CCTGGCAACC
AGAGAAGCCT CCAGAAGTTG TTGA
 
Protein sequence
MKGYLGIDVG SVSTNIVFMD EQTNVLESLY LRTNGQPVAT VQKGLGQIKE KLPAKVVVRG 
VGTTGSGRQL TGIVVGADAI KNEITAHAVA ASHLVPGVQS VLEIGGQDSK IIILRNGVVT
DFAMNTVCAA GTGSFLDQQA SRLNIAIEEF GDIALRGSTP VRIAGRCAVF AESDMIHKQQ
MGYNLDNILA GLCEALVRNY LNNVGKGKEI LGPVVFQGGV AANAGMRKAF ERALGLEVQI
PKYFNVMGAV GAAMLAKDAV SKGVPTQFKG FGVADMEYKA GSFECDGCPN LCEVIEMAEQ
GKIIARWGDR CGKWSNALAT REASRSC