Gene Dred_1119 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1119 
Symbol 
ID4957668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1189310 
End bp1190818 
Gene Length1509 bp 
Protein Length502 aa 
Translation table11 
GC content40% 
IMG OID640180289 
Productsodium:neurotransmitter symporter 
Protein accessionYP_001112479 
Protein GI134298983 
COG category[R] General function prediction only 
COG ID[COG0733] Na+-dependent transporters of the SNF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGACAAC GTGAACAATG GGGAAGTAGA TTTGGCTTCA TCATGGCGGC AGTGGGATCT 
GCCGTAGGCT TAGGGAACAT ATGGAGATTT CCTTACATGG CCGCTGATAA CGGCGGTGGT
ATCTTTTTTC TTTGTTACTT ATTTGCTCTG TTAACTGCAG GAATTCCCAT TATGATTTTG
GAATTTGGTA TTGGACACAA GTACCGTGGA GGCGCTCCCC TTACCTTTGC ACGTATAAAT
CGTAAGTGGG AATGGCTGGG TTGGTGGCAA ATTTTAGTAT GTTTTTTCAT CGCTGTATAT
TATGTTGTGG TTATTGCTTG GGCCATTTCC TTTACTGGTT TCTCTATTAC ACAAGCCTGG
GGAGATGCTC CAAAAGACTT TTTCTTCGGT AATTACCTAC AGTTAACTGG TGGACCATTT
GAATTAGGTG GAATTAATAC ACAAATTTTA TTGCCATTGG CCCTTGCTTG GGTTATTGCT
TTTATTTCTA TCTACACTGG GGTAAAGTCT GGTATTGAAA GAGTAGCTAA GGTACTGATT
CCTATTTTAT TTTTTATGGT CGTAATCATT GCAATTCGCG GAGTGACTTT GCCTGGGGCA
GCGGCTGGCT TAAATTTCTT ATTCGAACCT GATTTTAGCA GATTAACAGA CTTTAAGGTT
TGGACTGCCG CCTATGGTCA AATTTTCTTT GATTTAAGTA TTGCATTTGC AATTATGATT
ACTTATTCTA GTTATCTTCC AAAAAATTCT GACGTTGTAG GCAATGCTTT TACAACCTGT
TTAACCAACT GTAGTTTTAG TTTGTTAGCT GGTATGGCAG TATTCAGTAT TCTTGGCCAC
ATGGCTTTAA CTCAAGGTGT TCCAGTAAGT GAAGTTGCGG GTGCCGGTGT TGGTCTGGCT
TTTATTACCT TCCCAGCAGC CATTAGTACA TTAGGTAGTG CTGCTCCTAT TTTTGGAGTG
CTGTTCTTCC TAGCATTGAC CTTTGCTGGA ATAACTTCAT TAATTTCTAT TAACGAAGCA
GCCATTTCTG CTATTATGGA TAAATTCGAT CTAGGGCGAA AGAAGGCAAC TGTTCTATAT
ACCGGAACTG CTGCAGTATG CAGCCTGTTG TTTGCAACGG GTGCGGGTCT ATACATTCTC
GATATTGTTG ACCACTTTGT CAATAACTTT GGCATTGTAT TTGGCGGTTT ATTAGAAGTT
CTGCTAATTG GTTGGATGTT TAATCTAAAA TCCATTAAAG ATCATGTAAA CCCAATTTCC
GACTTTAAGA TTGGTAACTG GTGGATCTTC TCAATTAAAA TAGTTACTCC ACTGGTTGCA
GGTTACACAG GAATCATGAC TTTAATTGCA GACTTGCAGA AACCCTATGA AGGTTATCCC
CAGGACGCCT TATTCTGGCT CGGTTGGTTT TTGATGATTG TGATAATGGT TGGTGGATTC
CTAATGGCTT CCGTAAAATG GAGAGATGAA CAATCTCTGG TTAAAGGGGG CGTAACACTT
GACAGGTAG
 
Protein sequence
MGQREQWGSR FGFIMAAVGS AVGLGNIWRF PYMAADNGGG IFFLCYLFAL LTAGIPIMIL 
EFGIGHKYRG GAPLTFARIN RKWEWLGWWQ ILVCFFIAVY YVVVIAWAIS FTGFSITQAW
GDAPKDFFFG NYLQLTGGPF ELGGINTQIL LPLALAWVIA FISIYTGVKS GIERVAKVLI
PILFFMVVII AIRGVTLPGA AAGLNFLFEP DFSRLTDFKV WTAAYGQIFF DLSIAFAIMI
TYSSYLPKNS DVVGNAFTTC LTNCSFSLLA GMAVFSILGH MALTQGVPVS EVAGAGVGLA
FITFPAAIST LGSAAPIFGV LFFLALTFAG ITSLISINEA AISAIMDKFD LGRKKATVLY
TGTAAVCSLL FATGAGLYIL DIVDHFVNNF GIVFGGLLEV LLIGWMFNLK SIKDHVNPIS
DFKIGNWWIF SIKIVTPLVA GYTGIMTLIA DLQKPYEGYP QDALFWLGWF LMIVIMVGGF
LMASVKWRDE QSLVKGGVTL DR