| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1101 |
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| Symbol | |
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| ID | 4956968 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 1172197 |
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| End bp | 1173513 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640180271 |
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| Product | pyrimidine-nucleoside phosphorylase |
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| Protein accession | YP_001112461 |
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| Protein GI | 134298965 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0213] Thymidine phosphorylase |
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| TIGRFAM ID | [TIGR02644] pyrimidine-nucleoside phosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGAATGG TGGACATTAT CCTGAAAAAA AGACGGGGCT TGGAACTTAC CTCGGAAGAA
ATAGAATTTT TTATTCAGGG TTATACCAAG GGAGAAGTAC CGGACTATCA AGCGGCAGCC
TTTCTAATGG CAGCCTTTTT CCAGGGACTA ACCCCCAGGG AAACGGGAGA TTTAACTATG
TCCATGGCTA GATCCGGTGA TCAGGCGGAC CTTTCATCGA TTCCCGGCAT AAAGGTCGAT
AAGCATAGTA CAGGTGGCGT TGGGGATAAA GTTACGTTAA TTCTCGGACC CTTGGTTGCG
GCTGCGGGCA TACCGGTGGC TAAGATGTCC GGTCGGGGCT TGGGACATAC CGGAGGCACC
ATTGATAAAC TGGAATCCAT TCCAGGCTTC CAAGTAACCA TGGATAACCA AAATTTTTTG
CAACAGGTAA AACGAGTAAA ATTGGCCGTT GTGGCCCAAA CCGGTCATTT AGCTCCGGCA
GATAAGAAAC TCTATGCATT ACGGGATGTT ACGGCCACTG TGGACAGTAT TCCCTTTATT
GCTGCCTCGG TCATGAGTAA AAAGATAGCC GCCGGGGCGG ATGCCATCGT ATTGGATGTT
AAGGTGGGCA GTGGTGCATT CATGAAAAAC TCAGAGGATG CCTTTTCCTT AGCCAGAACT
ATGGTGGAAA TTGGCACCAG CGTAGGGCGG CAAACGGTGG CCCTGGTTAC CGACATGGAT
CAACCCTTGG GTTTTGCCAT TGGCAATGCG TTGGAGGTAA AAGAAGCCAT CGAAACCCTA
AGGGGCAACG GGCCGGCTGA TTTACGGGAG CTATGCATTT ATCTGGGCAC CGAGATGCTA
AAACTGGCTG GCATAGCAGA GGATGAGTTA GTAGCCCGCA GAAAATTAGA AGAGCTCTTA
AGTAATGGTG GCGCCCTCAA TAAATTTAAG GAGCTTATTG AGGCCCAGGG CGGTGATCCT
GAAGTTGTGG AGAATCCCGA TCGATTACCG GGGGCCTCTA GTGTATATCC TGTGATATCA
GATATAGAGG GATATGTAAG GGAAATACAG TCTGAGCAGG TTGGCGTCGT TGCCATGTGG
CTGGGGGCTG GCAGGGCCAC TAAGGAATCG GTGATCGACC TAGGTGTGGG TGTGGTCTTA
AAGAAAAAGG TCGGTGATTA TGTAAAGAAA GGTGAGGTTA TCGCTGATTT ACATGTTAAT
GAAAACAAGG AAATTGCCAA GGTTGCAGAC CTGCTAAGGA AGGCCTATGT TTTACAAAGG
GAACCAGTCG TGGCCAAGGA AATTTTACTG GGTAAGGTAA CGAAGGAAAG TATATAA
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| Protein sequence | MRMVDIILKK RRGLELTSEE IEFFIQGYTK GEVPDYQAAA FLMAAFFQGL TPRETGDLTM
SMARSGDQAD LSSIPGIKVD KHSTGGVGDK VTLILGPLVA AAGIPVAKMS GRGLGHTGGT
IDKLESIPGF QVTMDNQNFL QQVKRVKLAV VAQTGHLAPA DKKLYALRDV TATVDSIPFI
AASVMSKKIA AGADAIVLDV KVGSGAFMKN SEDAFSLART MVEIGTSVGR QTVALVTDMD
QPLGFAIGNA LEVKEAIETL RGNGPADLRE LCIYLGTEML KLAGIAEDEL VARRKLEELL
SNGGALNKFK ELIEAQGGDP EVVENPDRLP GASSVYPVIS DIEGYVREIQ SEQVGVVAMW
LGAGRATKES VIDLGVGVVL KKKVGDYVKK GEVIADLHVN ENKEIAKVAD LLRKAYVLQR
EPVVAKEILL GKVTKESI
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