Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_1092 |
Symbol | |
ID | 4956783 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | + |
Start bp | 1164302 |
End bp | 1165435 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640180262 |
Product | peptidase T-like protein |
Protein accession | YP_001112452 |
Protein GI | 134298956 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2195] Di- and tripeptidases |
TIGRFAM ID | [TIGR01883] peptidase T-like protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00341854 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGGTAAATA AAGAACGAAT TATTCATGAA TTTTTGGAAA TGGTTCAGGT GGACAGTGAG TCTGGTGCAG AACGTCAAAT AGCTGATTTA TTAAAGGATA AGCTTACAGT TCTGGGCCTT GAGGTCGTTG AAGATAACGC CGGTTCTCAC ATTGAAGTTG GCCAGACAAC GGGGAACATT ATAGGTACCT TACCAGCTAA TGGAGGAAAG GGACCTCTTT TATTGTTCTC TGCTCATATG GATACAGTAA AGCCTGGTAA AGGTGTTAAA CCGATAAGAG AAAAGGGGAT CATTTCTTCT GCTGGTGATA CGATCCTGGG TTCCGATGAT AAAGCAGGAA TTGCAGCCAT ACTAGAGGCC CTTCGTGTAA TTGAAGAAAA GCAAATCAAG CACGGAGGCA TTCAAGTGGT CTTCACCATA GCAGAAGAAA AGGGGTTAGT TGGGGCTAAA AGATTGGACT ATGCCCTAAT AAAGGCAAAA CTGGGTTTTG TTTTAGACAG TGGTGGATCT CCGGGGGAGA TCATTATCAA GGCACCTACC CAGTATAGCT TTAAAGCCGC GGTAAAGGGA AAAGCAGCCC ATGCAGGGAT TGCTCCCGAA CATGGTATTA ATGCGATTGT TGTTGCCTCC AATGCCATTG CAAATCTAAA GCTTGGACGT ATTGACAAAG AGACAACTGC CAATATTGGG TTTATTTCTG GTGGTGTAGC CACCAATATT GTTCCTGAAA AAGTGGTTGT GGAGGGAGAA GCACGAAGTA TAAACCCTGC AAAGGCAAAG GAACAAATTG ATCACATGAT AGAAGAATTT GAAAAAGCTG CTGCTAAATT TAGCGCCAGT GTAGATATAG AACCGGTGAA GCAATATGAT AACATTGATT TGGCTGAGGA TTCTTTACCA GTGCAGATTG CCCTCAGGGC TGCAGAAAAT GCCCAAATAA AACCTCACTT GGGGCAGACT GGTGGTGGAA GTGATGCCAA CGTCTTTAAT GGCCAGGGGA TTGCCTGTGC CAACCTTGGC ATTGGCATGT CCAAGGTCCA CACAACAGAA GAGTTTATCA CCGAAGAACA TTTGGTAGAA AACGCCAAGT ATGTGGTGGA AATCATCAAG GTAGCCCAAG AAATAGGGGC CTAA
|
Protein sequence | MVNKERIIHE FLEMVQVDSE SGAERQIADL LKDKLTVLGL EVVEDNAGSH IEVGQTTGNI IGTLPANGGK GPLLLFSAHM DTVKPGKGVK PIREKGIISS AGDTILGSDD KAGIAAILEA LRVIEEKQIK HGGIQVVFTI AEEKGLVGAK RLDYALIKAK LGFVLDSGGS PGEIIIKAPT QYSFKAAVKG KAAHAGIAPE HGINAIVVAS NAIANLKLGR IDKETTANIG FISGGVATNI VPEKVVVEGE ARSINPAKAK EQIDHMIEEF EKAAAKFSAS VDIEPVKQYD NIDLAEDSLP VQIALRAAEN AQIKPHLGQT GGGSDANVFN GQGIACANLG IGMSKVHTTE EFITEEHLVE NAKYVVEIIK VAQEIGA
|
| |