Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_1091 |
Symbol | |
ID | 4956651 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | + |
Start bp | 1163335 |
End bp | 1164171 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640180261 |
Product | hypothetical protein |
Protein accession | YP_001112451 |
Protein GI | 134298955 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000523541 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACACAAC TTACTTATGT TTATTTTATT GTTTCTTTGC TGGTCTCCTA TGGGGTGGCC AGAATAATCC TGCCAAGCAT TTTGAAACTG ATTACAGAGG CGGGCTATGT TAGAGCAAAT TTTCGAGGGG ATGCTATTCC AGTTGGAGTA GGACTTGTGT TTTTTATAAG CGTCCTTTTA CCAACAAGCT TTGTACTATT CCTAAATACA GATAGGTACC AACCCAGTGC CTTGCTCTAT TTATTCGTCC TAGGTTCTAT GACATTATTG GGTATGACCG ATGACATCTT TGGTTCTCGG GCAGATAGTG GTCTAAAGGG ACATATTAAA AAGATGCTCC GGGGGGAATT AACAACCGGG GGGTTAAAAC TGGCGGCCGG GGGCGTCATG TCTATGGTTG TAGCTGTATC CATTAGTAGT CACTGGCAAG ATATTGTCCT TAATACTCTG GTGATAGCCC TTTCTATCAA TGCAATCAAT TTATTGGACC TTCGGCCAGG TCGGGCTGGC AAGGGTTTTT TATTAGGAGG CATCCTCCTG TTTCTGGGTG GTTGGCCATC CTTTAATCTG GTTTGGTATG TCATGACAAT GGGTGCTTTG TTAGCTTACC TCCCTACTGA CCTGAAGGCT AAAGCTATGA TGGGCGATAC CGGTTCCAAT GCCCTGGGGG CCACCATAGG CATAACTTCT GTACTGGTGT TACCGGAAAC GGTTAAAGTC AGTTACCTAG TATTTTTAAT AGCCTTTCAT TTATTTACAG AGAAGTACAG TTTAACAAAA ATCATTGAAA AAAATAAAAC GCTCAATTAT TTGGACCAAT TAGGAAGAAA TCAGTAA
|
Protein sequence | MTQLTYVYFI VSLLVSYGVA RIILPSILKL ITEAGYVRAN FRGDAIPVGV GLVFFISVLL PTSFVLFLNT DRYQPSALLY LFVLGSMTLL GMTDDIFGSR ADSGLKGHIK KMLRGELTTG GLKLAAGGVM SMVVAVSISS HWQDIVLNTL VIALSINAIN LLDLRPGRAG KGFLLGGILL FLGGWPSFNL VWYVMTMGAL LAYLPTDLKA KAMMGDTGSN ALGATIGITS VLVLPETVKV SYLVFLIAFH LFTEKYSLTK IIEKNKTLNY LDQLGRNQ
|
| |