Gene Dred_1090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1090 
Symbol 
ID4956679 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1162520 
End bp1163230 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content47% 
IMG OID640180260 
Productglycosyl transferase family protein 
Protein accessionYP_001112450 
Protein GI134298954 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.11948 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCAAAG TGTCAGTGGT AATACCCGCC CATAATGAAG CCAATAGAAT TTCCGATACC 
ATAAAAGGAG TTCAAAGGAT TCCGGAGGTA TCGGAAATTC TTGTGATCGA TGATGCATCC
ACAGATGGCA CCGCTGAACT GGCGGAACAG ACAGGAGCTA CCGTAATTAG ATTATCTAAA
AATATGGGAA AAGGAGGGGC ACTAAACGCT GGGGTAGCCA AGGCTTCCGG TGATATAGTG
GCCCTTTTGG ATGGCGATTT AGGAAGCAGT TCCAGTGAAG CTAGAGCTCT TATATTACCG
GTTTTACATA ATACTGCCGA TATGACCATT GCCCAATTTC CCCGTGCCAA GAAAAAGGGT
GGTTTTGGAC TGGTAAAAAA TCTGGCCCGA TCCGGTATCC GATATTATGC AGGCTTAGAA
AGCAATGCTC CGTTATCCGG TCAGAGGGTG ATGACCCGAC AGGTGTTGGA AACAGTTGTT
CCCTTTGCCT CGGGTTATGG TGTTGAAGTG GCCTTAACCA TTAAAGTTGC CCGAGCAGGA
TTTCGAGTTC TTGAGGTCCC CACACAAATG TCCCACGCAG AAACCGGCAG GGACCTAAGG
GGTTTTATGC ACCGTGGCAA ACAATTTGTT CATGTGGCCA GGGTACTGGC GGGCTGTTTT
GTACAATATG GTTTTAATGG TTTTACCAGC GCCAAGGGTT GTCAAAAATA A
 
Protein sequence
MAKVSVVIPA HNEANRISDT IKGVQRIPEV SEILVIDDAS TDGTAELAEQ TGATVIRLSK 
NMGKGGALNA GVAKASGDIV ALLDGDLGSS SSEARALILP VLHNTADMTI AQFPRAKKKG
GFGLVKNLAR SGIRYYAGLE SNAPLSGQRV MTRQVLETVV PFASGYGVEV ALTIKVARAG
FRVLEVPTQM SHAETGRDLR GFMHRGKQFV HVARVLAGCF VQYGFNGFTS AKGCQK