| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1086 |
|---|
| Symbol | |
|---|
| ID | 4956595 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | + |
|---|
| Start bp | 1157591 |
|---|
| End bp | 1158361 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640180256 |
|---|
| Product | response regulator receiver protein |
|---|
| Protein accession | YP_001112446 |
|---|
| Protein GI | 134298950 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | [TIGR02875] sporulation transcription factor Spo0A |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATGAGAA AGGCAATAAA AGTGTTAATT GCAGATGATA ACAGAGATTT CTGTGAACTA
CTGAAGGAAT TTATTAATCA ACAGGATGAT TTTGTGTTAG TGGGTATTGC TAATAATGGG
TTGGAAGCCT TGGAAATAAT TAATTCAGAA GCACCTGATG TTATGGTTTT AGATATTATT
ATGCCACACC TGGATGGCAT TGGTGTGCTA GAAAAGATAT CCACAGGGAC AGTTGCTCAT
AAGCCAAAGG TAATTATGTT AACTGCCTTT GGGCAAGAAA GTGTTACATC CCGTGCTGTG
GAATTAGGGG CAGATTATTA TATTTTAAAA CCCTTTGATT TTGCCGTACT GGCAACCAGA
ATCCGCCAGC TGGCTGATGG AGTGGCAGTG GCCCAATATA TTTCACCCAG TAAACCTCGC
AATCTGGATG TCGCCGTAAC CAATATTATT CATGAAATGG GAGTTCCAGC CCATATTAAA
GGATATCATT ATTTAAGAGA AGCTATTTTA TGTGTAATCA ATGAAGTTAA CCTCTTAGGT
GCCGTTACTA AAGAACTTTA TCCTATGATA GCACAAAAAT ATCAAACCAC ACCCAGTCGT
GTGGAAAGGG CCATTCGACA TGCCATTGAA CTGGCCTGGG ATCGTGGAAA TATTGAAATG
ATGACCAAAT TCTTTGGCTA CACCATTAAC TTGGAGCGTG GTAAACCCAC CAATAGTGAA
TTTATTGCTA TGGTAGCTGA TAAATTAAGA ATTGAGAGTA AGGTAAGTTA G
|
|---|
| Protein sequence | MMRKAIKVLI ADDNRDFCEL LKEFINQQDD FVLVGIANNG LEALEIINSE APDVMVLDII
MPHLDGIGVL EKISTGTVAH KPKVIMLTAF GQESVTSRAV ELGADYYILK PFDFAVLATR
IRQLADGVAV AQYISPSKPR NLDVAVTNII HEMGVPAHIK GYHYLREAIL CVINEVNLLG
AVTKELYPMI AQKYQTTPSR VERAIRHAIE LAWDRGNIEM MTKFFGYTIN LERGKPTNSE
FIAMVADKLR IESKVS
|
|---|
| |