Gene Dred_1085 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1085 
Symbol 
ID4956559 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1156068 
End bp1157405 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content40% 
IMG OID640180255 
Productpeptidase S55, SpoIVB 
Protein accessionYP_001112445 
Protein GI134298949 
COG category 
COG ID 
TIGRFAM ID[TIGR02860] stage IV sporulation protein B 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.434568 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGACTTCC GGAAAAAGAA AGTGCTAGTA TTACTACTGG CAGTTATATT CTTGGGCCTT 
GGTTTACAGC TACCGTTCCA AACTTTAAGA AATATGCCAT TGCATCAACA TGTATCTGTG
GGGGATAGTA TAGACTATGA TATTAATTTA CCCGAATTCT TAACAAATCA ATTTGAATTT
AATATAGATG GTGTAAAACC TTCTTGTTTT CATTTAGGCC AAACTACTCC GGTGGCAGCA
AAGCTAGGGG ATCTAAAGGT TGAAGTGAGA TTATTTGGTA TTATTCCAGT AAGACAAATG
ATGGTCAGTG TAGTACCTGA GATCCGGGTA ATACCTGGAG GACAGGCCAT TGGAGTAATG
GTGGATTCAG AAGGCGTGAT GGTTGTGGGA AGGTCAGCTA TTATTGATGA GAAGGGCGAG
CGTCATAATC CAGCAGCAGA AGCAGGGGTT GAACTGGGAG ATACACTGAT TAAGATTAAC
GGCCAAAAAG TAGAGACAGA GAGCCAGGTA AGGGCATTAA TTGATAAAAT GGGTCAATTA
AAAAAACCAT TGTCCATGGA ATTTAAGCGA AAAAATACAA AAGAACATTA CCATACAAAG
ATTTCTCCTA TTTACTGTAA TGAAACGCAG CGTTATCGGG TAGGTTTATT TGTTAGGGAT
AGCACTGCTG GGGTAGGAAC CATGACCTTT TATCATCCAG AATCCAGATC CTATGGTGCA
TTAGGCCATA TTATAACAGA TATTGATACC TGTCAGCCTA TCAACTTGAA TAGCGGTAAA
GTTGTGGGAG CCCGGATAGA AGGCATTCGA ATGGGCAAAA AAGGCCAACC CGGAGAAAAA
TTGGGGGTAT TTAGGGCAGA AGAACAAATA TCCGGTAACA TTACAAAAAA TACAAATTGT
GGTATCTTCG GTAAGTTGGA TAAAGATCCT AAGAATCTTT ACAGCAAAAC GGCTATACCC
GTTGCGATGG CTTCAGATAT TAAAGAAGGT CCTGCTGAAA TCTATACTGT ACTTAAGGAT
AATAAAATAG AGAAGTTTAG CATTGAGATA CAAGAAATTA TCCCCAATGG TAAAGATGAA
GGCAAAGGGA TGATCATTAA AATCAATGAC TCCAAACTAC TTGCAAAGAC CGGAGGGATT
ATACAAGGAA TGTCAGGGAG TCCTATTATT CAAGACGGTA AGTTGGTTGG AGCGGTGACT
CATGTCTTTG TTAATGACCC CTCAAGAGGG TACGGTGTCC TTGCAGAATG GATGTTGTAC
ACTGCCAATG TGCTACCAAA ACATGTAAGC AAAAGAAAAA ACGAACAATT TGATGTTAGA
ACAAATGTGG CTTGCTAA
 
Protein sequence
MDFRKKKVLV LLLAVIFLGL GLQLPFQTLR NMPLHQHVSV GDSIDYDINL PEFLTNQFEF 
NIDGVKPSCF HLGQTTPVAA KLGDLKVEVR LFGIIPVRQM MVSVVPEIRV IPGGQAIGVM
VDSEGVMVVG RSAIIDEKGE RHNPAAEAGV ELGDTLIKIN GQKVETESQV RALIDKMGQL
KKPLSMEFKR KNTKEHYHTK ISPIYCNETQ RYRVGLFVRD STAGVGTMTF YHPESRSYGA
LGHIITDIDT CQPINLNSGK VVGARIEGIR MGKKGQPGEK LGVFRAEEQI SGNITKNTNC
GIFGKLDKDP KNLYSKTAIP VAMASDIKEG PAEIYTVLKD NKIEKFSIEI QEIIPNGKDE
GKGMIIKIND SKLLAKTGGI IQGMSGSPII QDGKLVGAVT HVFVNDPSRG YGVLAEWMLY
TANVLPKHVS KRKNEQFDVR TNVAC