Gene Dred_1079 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1079 
Symbol 
ID4956310 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1150813 
End bp1151619 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content49% 
IMG OID640180249 
Producthemolysin A 
Protein accessionYP_001112439 
Protein GI134298943 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1189] Predicted rRNA methylase 
TIGRFAM ID[TIGR00478] hemolysin TlyA family protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000241342 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCTGTTA CCAAAGAACG TTTAGATGTC TATCTCGTAA ACAATGGTTT TTTTCCCAGT 
CGGGAAAAGG CCCGTGCCGC GGTGATGGCA GGGCTTGTTT TTGTTGATGG CGAACGGGTG
GATAAGCCCG GACACCAGGT GAAAGCAGAG GTTTCTATAC AAGTACAGGG CAAGACACTG
CCCTTTGTTA GCCGTGGTGG CCTTAAGCTG GAAAAGGCCA TGAAAGAGTT TGATATTGAT
TTAAAAGATC GGGTGGTCAT CGATATTGGG GCATCCACCG GTGGTTTTAC TGATTGTGCC
TTGCAAAATG GAGCTAGGTT GGTCTACGCC GTTGATGTAG GCTATGGACA GTTAGCCTGG
AAACTTAGAT CTGATCCAAG GGTTATCAGT ATGGAGCGGA CCAATATTCG GTACTTGGAG
CCCGAAGCAT TGACGGAACG CCCCAGCTTT GCCACCGTCG ATGTTTCCTT TATTTCGCTG
GCCCTAGTTT TGCCTAGGGT AGATCTTCTG ACTGAATTGG TGGCGGAAGG GATTGCTTTA
ATTAAACCCC AATTTGAGGC CGGCAGAGAA CGGGTTGGCA AAAAGGGTGT AGTGCGTGAT
CCTGAAGTGC ATATAGAGGT GATCGAGAAG GTCCTGGGAG TTGTGCACAA TCTGGGATGG
CAGGCGGTTG GACTTGCTTT TTCGCCTGTA CGGGGTCCAG AAGGTAATAT TGAATATTTA
CTGTACTTTA CAAAGGGTCA GCAGGAAAGA GGAACTGCGC CCAATATTCG GGAGACTGTC
TACAGTGCCC ACACTACCCT TGAGTAA
 
Protein sequence
MAVTKERLDV YLVNNGFFPS REKARAAVMA GLVFVDGERV DKPGHQVKAE VSIQVQGKTL 
PFVSRGGLKL EKAMKEFDID LKDRVVIDIG ASTGGFTDCA LQNGARLVYA VDVGYGQLAW
KLRSDPRVIS MERTNIRYLE PEALTERPSF ATVDVSFISL ALVLPRVDLL TELVAEGIAL
IKPQFEAGRE RVGKKGVVRD PEVHIEVIEK VLGVVHNLGW QAVGLAFSPV RGPEGNIEYL
LYFTKGQQER GTAPNIRETV YSAHTTLE