| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1042 |
|---|
| Symbol | |
|---|
| ID | 4956889 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | + |
|---|
| Start bp | 1115479 |
|---|
| End bp | 1115841 |
|---|
| Gene Length | 363 bp |
|---|
| Protein Length | 120 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640180212 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001112402 |
|---|
| Protein GI | 134298906 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4537] Competence protein ComGC |
|---|
| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAAAAA TTGCAAAAAT GCTTCGCAAC AGAAAAGGCT TCACTCTGGT GGAGTTGATG
GTGGTAGTTG CAATTATTGG TATTTTAGCG ACTATTGCTG TACCAATGTA TAACAATGTT
ACAAAAGATG CTCAAGATGC CGCTAATGAA GCAACTGCAA GAACACTTAA TGGAGCAATT
TCTATGTATA TGGCCAAACA GACTAGTACA GAAGTTGCAG CCTTTGTAGT TAAGGATAAA
GCAGGTGTCC TTGCTGAGTT AGTTGCTAAG GGGTATATAC AAGCAGGTGC TGATGTAACA
AATTTGAATT TTACTGATGG TACTGCTACA CCCCTTAAAG CACCTGTTTA TGTTGCACCT
TAA
|
|---|
| Protein sequence | MLKIAKMLRN RKGFTLVELM VVVAIIGILA TIAVPMYNNV TKDAQDAANE ATARTLNGAI
SMYMAKQTST EVAAFVVKDK AGVLAELVAK GYIQAGADVT NLNFTDGTAT PLKAPVYVAP
|
|---|
| |