| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1034 |
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| Symbol | |
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| ID | 4958048 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 1107231 |
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| End bp | 1108907 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640180204 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_001112394 |
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| Protein GI | 134298898 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTTA CCCGTGGTTT TTTAGGTACC TGGTTAGTAA ATGAAGGTAT TATTAGCCAG
AAACAGTTGG AAGATGCCCT GGAATATCAA AGACAGCACC CGGGGAAAAC CGGTGTTCTG
GGTAAAACCC TGGTACAGTT GGGGTTTTGT TCAGAGGACG ATATAGCCAG AATCATTGCC
AAGCAGGCGG GGGTTCCCTT TGTGTCACTG GAAAACCATA CCATAGACCC TGCAGCTATT
ACTGCCGTGT CTGTAGATGT TATGAAGCGC TATAAAGCCC TGCCCCTGGG TTTTAGTGAA
GGAAAGCTGA TGGTGGCAAT GCAAAAACCT ACGGATATTG TAGCCATCGA TAATTTACGT
GTCTTAACAG GCTTTGACAT TAAGCCAGTG TTTTCTCCCG ATAGTGAATT GGACGTTGCC
ATTGAAAAAT ATAGCAGAGA AGCAATGGAA TTTAACAAGG TTGAAGAAGA AACACCACAA
ATTGAAGAAA TTACAGCAAA TATAGATGAC GACCAGAAAC CGGCTGTCCA GTTAGCCAAC
ATGATCTTAT CCCAGGCTGT AGCCGCCAAG GCCAGTGACG TTCATATTGA GAGATATGAA
CAACGCATGA GGGTACGCTT TAGAATTGAT GGTGTATTGC ATGATATTAT GGAGCCGCCG
GTAAAGATGC ATGCCTCCCT GGTATCTCGC ATCAAGGTTA TGGCTAATAT GGATATAGCC
GACCGCAGGA TACCCCAGGA CGGACGTATA TCCCTGAAAA TTGAAGGGAG ACCCATTGAT
ATTCGTGTGG CTACCTTACC CACCAGTTAT GGTGAAAGGT TAACCATGCG CCTGTTGGAT
AACTCAGCCA GAATGATTAC CCTGGAAGAA CTTGGTGTAG CACCCAAAAT TCTTGAAAGA
TACCGTGAGA TTGTTCAATT ACCCTACGGT TTCATACTGG TAACCGGGCC CACCGGCAGT
GGCAAAAGTA CCACCCTATA TGCCAGCCTA AACGCTGTGG ATTGGGTCGG TAAGAATGTT
ATTACCATTG AAGACCCTGT GGAATACCGG ATGGAAGGCG TAAACCAGAT TCAGATTAAT
CCCCAGGCAG GTCTTACCTT TGCCTCAGGT CTTCGCTCCA TCCTGCGCAG TGACCCGGAT
ATTATCATGG TGGGTGAGAT TCGTGATCAA GAAACTGCAA AAATTGCCAT AGAATCGGCC
ATGACTGGAC ATATGGTCTT TGCTACCCTA CATACCAATG ATGCCCCTGG GGCCATCAGC
CGTTTAACCG AAATGGGAAT AGAACCCTTT CTTACTGCTT CATCTTTAGT ATGTGTTTTA
GCCCAGCGCT TGGCCCGGGT CCTTTGCCCC CATTGTAAGG AAGCCATTCA GTTAACCAGA
AGGGATTTGG CAAAGGTGCC GGACTTCCCC TTTGCAGAAG GAGAGGACGT GGTTACCCTA
TATAAGCCCA AAGGCTGTAT GCGTTGCAGC AATACCGGCT TTCGAGGCAG GGTAGGAATC
TACGAACTAT TATTTGTTAC AGAGAAAATT CAACGCCTGG CCCTGGAGAA GGCCTCGGCC
AAAGAAATAA CAAGTGCCGC CCTAGAAGAG GGCATGGTTG TTCTCCGGCA GGATGGTTTG
TTAAAGGTAA AACAAGGTAT CACTTCGCTG GAAGAAGTAT TGAGGGTGGT TGTTTAA
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| Protein sequence | MKFTRGFLGT WLVNEGIISQ KQLEDALEYQ RQHPGKTGVL GKTLVQLGFC SEDDIARIIA
KQAGVPFVSL ENHTIDPAAI TAVSVDVMKR YKALPLGFSE GKLMVAMQKP TDIVAIDNLR
VLTGFDIKPV FSPDSELDVA IEKYSREAME FNKVEEETPQ IEEITANIDD DQKPAVQLAN
MILSQAVAAK ASDVHIERYE QRMRVRFRID GVLHDIMEPP VKMHASLVSR IKVMANMDIA
DRRIPQDGRI SLKIEGRPID IRVATLPTSY GERLTMRLLD NSARMITLEE LGVAPKILER
YREIVQLPYG FILVTGPTGS GKSTTLYASL NAVDWVGKNV ITIEDPVEYR MEGVNQIQIN
PQAGLTFASG LRSILRSDPD IIMVGEIRDQ ETAKIAIESA MTGHMVFATL HTNDAPGAIS
RLTEMGIEPF LTASSLVCVL AQRLARVLCP HCKEAIQLTR RDLAKVPDFP FAEGEDVVTL
YKPKGCMRCS NTGFRGRVGI YELLFVTEKI QRLALEKASA KEITSAALEE GMVVLRQDGL
LKVKQGITSL EEVLRVVV
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