Gene Dred_1030 details

Gene Information

• Locus tag: Dred_1030
• ID: 4957885
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfotomaculum reducens MI-1
• Kingdom: Bacteria
• Replicon accession: NC_009253
• Strand: +
• Start bp: 1102137
• End bp: 1102829
• Gene Length: 693 bp
• Protein Length: 230 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 640180200
• Product: fimbrial assembly family protein
• Protein accession: YP_001112390
• Protein GI: 134298894

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTACAAAG TAAACCTATT ACCCAACCAT TTATCACCAT CGGAAGCAAA GTACGACCCC 
AGGAAGAACT ATTTTATTAT GGGAACAATA CTCATGCTAA TTTGCCTGTT AATTGTTTAT 
GGCTTGTTTT ACAGCAAGCT AATCCTATTA CAAAGCCAAT TGGAGCAGGA AACCAAAAAC 
CTAGTGGAAC TGCGGGAGAA AATTCAACCC ATTCAAAGGT TGGCCTCAAT GAACCAAAGG 
AAAAAAGAAC AATACCTCAC CCTTTCTACA ATGATTAAGA ACCGCCTGCT ATGGTACGAT 
TTGTTGCAGG AATTGCCCCT GGCCTTGCCC ATGGATACCT GGTTAACAGG CATAGAAATA 
AAAAAGGTGG AGAACATGCC ACGGGGTAGC GGATTTGTGT CATCTGTTTT AGAGCTGCCA 
GCAAGGGCTC AAAAGAAAGA AAGCAAAGAA GCCACTGCCG ATATGCACCA GTCCCCGCCG 
GTTCCCAATA TGATATACCT ATACGGTGCC ACCTGGTCCA TGGGGTCTGT GGGTGTCCTG 
GTGGATAACC TGGGCCGGCT TCCCTATTTT GCAAATGTCA TGTTGGTTGA AGCAAGATAT 
GATCAGCAGT GGAAGGTAAT AAAATTTGAA CTGGCTGCCA GGGTCAAGGG AGGGGAGCGG 
CATGTTCAAA GGAGTACTTC TCCTAAGTCC TAG 

 

Protein sequence

MYKVNLLPNH LSPSEAKYDP RKNYFIMGTI LMLICLLIVY GLFYSKLILL QSQLEQETKN 
LVELREKIQP IQRLASMNQR KKEQYLTLST MIKNRLLWYD LLQELPLALP MDTWLTGIEI 
KKVENMPRGS GFVSSVLELP ARAQKKESKE ATADMHQSPP VPNMIYLYGA TWSMGSVGVL 
VDNLGRLPYF ANVMLVEARY DQQWKVIKFE LAARVKGGER HVQRSTSPKS