| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1018 |
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| Symbol | |
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| ID | 4956774 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 1090784 |
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| End bp | 1091659 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640180188 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_001112378 |
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| Protein GI | 134298882 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGACATT GTAGAATAAA TGGAAAGACC CAAGTGTGTG GTTTGTTTGG TTTTCCGGTG
GAACACTCCT TTTCTCCGGC TATGCATAAT GCAGCTTTTC AGCAATTAGA TTTGAATTGG
ACCTATGTTC CCTTTCGTGT TCACCCGGAT AACCTTAAAC AAGCAGTTAC AGGAATCTTT
TCATTAAATA TGGCTGGTGT CAATGTTACG GTACCCCATA AACAGAGGGT TATGCCTTTT
TTAGATGAAC TGGAGCCGGC TGCTCGAATC ATTGGGGCAG TTAATACCAT TGTTAACAAC
AATGGTAAAC TTGTGGGCTA CAATACCGAC GGCAAAGGTT TTGTTCGAGC ATTAACCGAA
GAGGCTCGTT TTAACCCCCT AGGAAAAAGT GCAATTCTTA TTGGCGCAGG GGGAGCTGCC
CGGGCCGTTG CAGTACAACT GGCCCTTTCT GGACTACGAA CCATTTACAT AACCAACCGT
AATCAAGAAA AAGCTGAAGA GTTGGCCAGA GATATCCTTG AATCCACTGA CACCAGTGCC
AGCATGATAC CCTGGGGGAA TAACCTCTTA GGGAAACGGA TGGTTGAAGT AGACTTGGTG
GTACAGGCCA CGCCCCTTGG TATGAGCCCG GAAGTGGATC AAGTGCCGGA GTTTCCCTTT
CAGATGTTAA CTCCTCAACA CCTTGTTTGT GATTTAATCT ATAATCCGGA ACAAACATGC
TTTCTTAGAA GAGCAAAGAG CAGGGGCAGC AAAACCATGA ATGGTTTGGC AATGCTGCTC
TATCAGGGAG TTTTAGCCTT TGAATTATGG ACAGGTTTTA CGGCGCCGGT GGATGTTATG
AGGAATGTGT TGCATAAGCA AGTTGCTAAA GGTTAG
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| Protein sequence | MGHCRINGKT QVCGLFGFPV EHSFSPAMHN AAFQQLDLNW TYVPFRVHPD NLKQAVTGIF
SLNMAGVNVT VPHKQRVMPF LDELEPAARI IGAVNTIVNN NGKLVGYNTD GKGFVRALTE
EARFNPLGKS AILIGAGGAA RAVAVQLALS GLRTIYITNR NQEKAEELAR DILESTDTSA
SMIPWGNNLL GKRMVEVDLV VQATPLGMSP EVDQVPEFPF QMLTPQHLVC DLIYNPEQTC
FLRRAKSRGS KTMNGLAMLL YQGVLAFELW TGFTAPVDVM RNVLHKQVAK G
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