Gene Dred_1017 details

Gene Information

• Locus tag: Dred_1017
• ID: 4956658
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfotomaculum reducens MI-1
• Kingdom: Bacteria
• Replicon accession: NC_009253
• Strand: +
• Start bp: 1090234
• End bp: 1090737
• Gene Length: 504 bp
• Protein Length: 167 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 640180187
• Product: HAD family phosphatase
• Protein accession: YP_001112377
• Protein GI: 134298881
• COG category: [R] General function prediction only
• COG ID: [COG2179] Predicted hydrolase of the HAD superfamily
• TIGRFAM ID: [TIGR01662] HAD-superfamily hydrolase, subfamily IIIA; [TIGR01668] HAD superfamily (subfamily IIIA) phosphatase, TIGR01668

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTAGCAA AGCTTTATCC TAAGCTGTTC GTACCCTCTT TATTTGATAT CAACCTGTCA 
GACTTAAAGA GAGCAGGCAT AAAGGCCATA CTATTTGATA TTGATAATAC GTTAATTCCC 
TGGGATCGAA AGGATTTGGA TCCCAAAATT GAAAAGTGGT TTCGCAGCCT TGGTCAAGAG 
GGCTTCAAAC TGTGTTTTGT ATCCAATAAC GATGAAAGAA GGGTTATAGC CTTAACTTCT 
TTATTACAGG TACCCGGTGT TCATAAGGCT GCAAAACCCC GTCGTAAAGG TTTACGCAGA 
GCTCTTAGAA TTTTGGGGAC CGATATTCAT GAAACTGCTC TGGTTGGGGA TCAAGTTTTT 
ACAGATGTTC TAGCTGGCAA TCGGCTGGGC TTGTATACAA TCCTAGTGGC TCCATTGGCC 
GGCAAGGAAT TTATCGGAAC AAGAATAAAT AGAAAATTAG AGAAGTTAGT TTTAAGACGC 
ATTAAAAAAA GGTATTTGAA ATAA 

 

Protein sequence

MLAKLYPKLF VPSLFDINLS DLKRAGIKAI LFDIDNTLIP WDRKDLDPKI EKWFRSLGQE 
GFKLCFVSNN DERRVIALTS LLQVPGVHKA AKPRRKGLRR ALRILGTDIH ETALVGDQVF 
TDVLAGNRLG LYTILVAPLA GKEFIGTRIN RKLEKLVLRR IKKRYLK