| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1016 |
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| Symbol | |
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| ID | 4956562 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 1089191 |
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| End bp | 1090042 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640180186 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001112376 |
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| Protein GI | 134298880 |
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| COG category | [R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0517] FOG: CBS domain
[COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTGTG TGGAACAAAT CATGATAAGA GAACTAATTA CTATTTCCCC GTTCGATTCT
GTCGGACGGG TTGTTAATGT AATGGAAAAA CACAAAATAG GTGGTTTGCC GGTCCTGGAA
AATAAACGTC TGGTGGGAAT TATAACATCT CGGGATGTGA GAAAGGCTCA TCCAAATCGA
TTGGTAGCAG ATGCAATGAG CAGAGAGGTT GTAACCGTTA TGCCTCAATT TTCTCTTTGG
CAGGCTAAGG AACTGATGGA AAATCACTGT ATCGAGCGGT TAGTGGTGTT AAAAGAAGAT
TATCCAGTTG GTCTGATCAC AAAGTCGGGT CTTATAACGG AGCTGGGAAA ATATACTGAT
GCGCTAACAG GTTTGCCTAG GGCGGAGTTC TTATATGATA AGGCCCTGGA ATTCTTACGG
AAAGGGCAAG AGATTGCTAT CATTTTTTTA GATCTGGATG ACTTTGGCTT TATAGATAAA
CAATTTGGCC ATGTGGTAGG GGATGAAATC CTACGTCAGA TGGCTCAAGT ATTAAAGGGT
ACAACTCAAG ATAAGCTGGA TTATCTATGT CGCTATGCGG GAGACGAATT TGCCATTGTA
ACAATAAGAC CTTGGGAGGA TGCCCAAAGG CTGGCACAGG GGATTGTTGA AGCCATTTCT
CTGGAAAAAT GGCCCCAGTT AATTAATGTT AAGGGGTCAG CGGGGGTTGT GGGAAGTCAG
ATCATGTGTT GCCATTCAAT TAATAGGGAA GCAGATGTGA TATCTGACCT CTTCAATATG
GCCAGCTTGG CTTCGACGAA AGCCAAAAAG GAAGAAGGCT CCATTGTAAT TGCAGGACAA
GTTAAGTTAT AA
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| Protein sequence | MNCVEQIMIR ELITISPFDS VGRVVNVMEK HKIGGLPVLE NKRLVGIITS RDVRKAHPNR
LVADAMSREV VTVMPQFSLW QAKELMENHC IERLVVLKED YPVGLITKSG LITELGKYTD
ALTGLPRAEF LYDKALEFLR KGQEIAIIFL DLDDFGFIDK QFGHVVGDEI LRQMAQVLKG
TTQDKLDYLC RYAGDEFAIV TIRPWEDAQR LAQGIVEAIS LEKWPQLINV KGSAGVVGSQ
IMCCHSINRE ADVISDLFNM ASLASTKAKK EEGSIVIAGQ VKL
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