| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1005 |
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| Symbol | |
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| ID | 4955688 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 1076848 |
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| End bp | 1077714 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640180175 |
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| Product | CRISPR-associated Csd2 family protein |
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| Protein accession | YP_001112365 |
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| Protein GI | 134298869 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3649] Uncharacterized protein predicted to be involved in DNA repair |
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| TIGRFAM ID | [TIGR01595] CRISPR-associated protein, CT1132 family
[TIGR02589] CRISPR-associated protein, Csd2 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTCGAAC CAATTAAGAA CAGGTATGAG TTTGTATTGT TCTTTGACGT AGAGAATGGA
AATCCTAATG GTGATCCTGA TGCTGGCAAT ATGCCTCGTA TTGATGCTGA AACTGGATTA
GGACTGGTTA CTGATGTTTG TCTTAAAAGA AAAATTAGAA ACTATGTAGA TATAGTAAAA
AACGGTATTG AAGGGTTTGA TATCTACGTG CGTGAAGGGT CAATATTAAA TAACCAGCAC
ATGAAGGCAT ATAGTGCCCT CGACATTAAG CCGGAATCAA AGAAACTGCC CAAGAATGAA
GAGGATGCCA GAAGGGTTAA AGCCTTCATG TGTAAGCACT TTTACGATAT CCGTACCTTT
GGAGCAGTTA TGACTACAGA GGTTAATTGT GGACAGGTGC GTGGCCCAGT ACAAATTAAC
TTTGCTCGCA GCATTGACCC AATTGTTCAA CAAGAGGTTA CCATTACAAG AATGGCGGTG
ACATCTGTAA AAGATGCTGA GAAGAAAGAT AGGGAAATGG GACGCAAACA TATTGTTCCC
TATGCATTGT ACAGGGCGGA AGGCTATGTT TCTGCCCATT TAGCTGAAAA GTCAGGATTT
ACTAAGGAAG ATCTAGAGTT GCTTTGGCAA TCATTGACAA ATATGTTTGA TCATGATCGG
TCGGCAGCCA GAGGTAAGAT GGCTACCAGA AAACTAATTA TTTTTGAACA TGAGACGGCA
CTAGGAAATG CCTCTGCACA TAGTCTGTTT GATATGGTTG AGGTTTCAAG AAAGGATCTA
ATCCGTCCAC CCAGAGCCTA TAGCGATTAT AAAGTAACGG TTAATATGGC AGCATTACCC
GCAGGGATTA AATTAATGGA AAAGTAA
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| Protein sequence | MFEPIKNRYE FVLFFDVENG NPNGDPDAGN MPRIDAETGL GLVTDVCLKR KIRNYVDIVK
NGIEGFDIYV REGSILNNQH MKAYSALDIK PESKKLPKNE EDARRVKAFM CKHFYDIRTF
GAVMTTEVNC GQVRGPVQIN FARSIDPIVQ QEVTITRMAV TSVKDAEKKD REMGRKHIVP
YALYRAEGYV SAHLAEKSGF TKEDLELLWQ SLTNMFDHDR SAARGKMATR KLIIFEHETA
LGNASAHSLF DMVEVSRKDL IRPPRAYSDY KVTVNMAALP AGIKLMEK
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