Gene Dred_1003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_1003 
Symbol 
ID4956209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1074379 
End bp1075044 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content49% 
IMG OID640180173 
ProductCRISPR-associated Cas5 family protein 
Protein accessionYP_001112363 
Protein GI134298867 
COG category 
COG ID 
TIGRFAM ID[TIGR01876] CRISPR-associated protein Cas5, Dvulg subtype
[TIGR02593] CRISPR-associated protein Cas5, N-terminal domain 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTTATG GTATCCGGCT TTTGGTTTGG GGAGAATTTG CATGCTTCAC AAGGCCGGAA 
ATGAAGGTGG AAAGAGTCAG TTATGATGTC ATGACTCCTT CTGCCGCCAG AGGCATATTG
GAGTCCATTC ACTGGAAACC ATCCATAGTC TGGAAGATAG ACAAAATCCA TGTACTAAAC
GAAATTAGGT TTGACAATGT TCGGCGCAAT GAGGTGGGCA GTAAAATCCC GACCGGCAAT
GTTCGGAAAG CCATGAAGGG GGAGCCTACC CTACTGTGCC AGTATGCCTC AGAAGACCGC
CAACAGAGGG CCACCCTTCT TTTACGTAAT GTGGCATACG TAATTGTAGC CCATTTTGAA
ATGACTAGTA AAGCGGGACC CCAGGATTCA CCGGAGAAGC ACTATGCTAT CTTTTCACGG
AGGGCCAGGC AGGGGCAGTG CTTCCAGCAG CCCTACTTTG GCTGCAGGGA ATTTCCAGCT
AAGTTTCGTC TTATAGAAGA GGATGAACCA ACCCCTCATT CCCTACATAA GGGAGATAAG
GATCTGGGAT GGATGCTGCT GGATATAGAT CATGAGGATG GAATGAACCC ACGGTTCTTT
AGGGCTACCA TGAAAGACGG GCTAATTGAA GTACCTCCGA TGGAAAGGGG GTTGACCGTC
CTGTGA
 
Protein sequence
MGYGIRLLVW GEFACFTRPE MKVERVSYDV MTPSAARGIL ESIHWKPSIV WKIDKIHVLN 
EIRFDNVRRN EVGSKIPTGN VRKAMKGEPT LLCQYASEDR QQRATLLLRN VAYVIVAHFE
MTSKAGPQDS PEKHYAIFSR RARQGQCFQQ PYFGCREFPA KFRLIEEDEP TPHSLHKGDK
DLGWMLLDID HEDGMNPRFF RATMKDGLIE VPPMERGLTV L