| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_1000 |
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| Symbol | |
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| ID | 4956033 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 1067917 |
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| End bp | 1070064 |
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| Gene Length | 2148 bp |
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| Protein Length | 715 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640180170 |
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| Product | hedgehog/intein hint domain-containing protein |
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| Protein accession | YP_001112360 |
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| Protein GI | 134298864 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01445] intein N-terminal splicing region |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTTGGG AAAATTGTGT AGCTAACATC AGAACCACCC TTGATCGAAA TGCAAAGGAA
GTTAATGAAG TAAACTGGTC TGCAATAGAC CAGGATGCTC TGGATAACGA TACATTTAGA
AATGGGTCAC CCTTCTCTCT GATATGTCCA AGCAGGCATT GCACGGATTT TGCCGATATT
TCTCCCCAGG CCCATAGGAT TTGTCGTTGC GAGGATATGA ACGGCAATCC GATACCTAAT
TGCGAACCTA AAGACTATTT GTATCCTTAT CCGTCTCAGG TTTGTTTAAA CATAGACAAT
CCAAGTGATT ATAGTGGTAA AAGAAGTCGG GCTTGCACTA GGCAGGGGGA CAGTTACTAT
CAACTTACCT GTCACTGCTG CTGCTCCTGC TTTGCATATG GAACCAAGAT AGGTACCCCC
AACGGGCACA AGAAAATAGA AAAGTTTGCA GTGGGTGATT TGGTCTTGGC AGCTGGTATC
GAAACCAGTG CCGGAGGGAT AAAATTAAAT TGGTCACCGT TGAAAGTGTC TTTTAGTTCT
GGTACAGGGC CTGACAGCCA CCAGCCTGCC ATGGTATATA TAAGGCACGG CGATACGGGT
TCCATTATAG TTACGCCGGA TCATTTATTT CTTATGCCTA ATGGAAAGTT GAAAAGGGCA
GATCGGCTGG TGCCCGGAAA AGATCAATTG GTTTCATACG AAGGTCGGCC CGTGCCCGTT
CATGAAGTGA GTATAGGAGA ATATGAAGGC GGTGTTCATC ACATTGCCAC CCAAAAGAAT
TTTACAGGGG ATTTGGATGG GCACCTGCTT TTATCTGAAG GGGTGGTTTC CGGTGATTTC
AATCTCCAGA TTCATGCTAC GGAATTAAAA GAAAAGTATT TTATAGTGGA TCATGACAGT
TATCCCCAAA TTGGCACCAA GGAATATATA GAACAAAATA ACGAGTTGGT ACAGGGAAGC
TATTTGAATT TTCAGGTTGC CGGCCTAAAC GAAAGCAATA CGGCACCTCA ACCCCTGAAA
TATTTCGTTC ATGGACAAAA AGTCTCGTAT ATTCCCGAAA CTGCGGCAAA ATACTTGAGC
AGCTTACAAG AAATCGATGT CAATGATAAC GCGGAAAAGC GCAGCTTTTC CGAAATGAAC
ATGGGAAATG CTGCGGTTAA TTACGTCCTT AAACTGTTCA GAGGATTTTA TTCAAACATC
ATCTTCCATC ATGACATTGC CCGCCTTGAG CCCAATGCAT ATGCCTTTAA CCAGTATGGA
AAGGATATAG TTGTCCTGTC TGGGGGACTG AGCAGGATTA AAAACCTGCA AATGGAAGGC
CTGGCGGTAA TATTAAGCCA TATGGTCACA AGACTTCAGA AAAGTGATCC CCTTGACTAT
AATGGTTATA CTTCCGTAGC CATGGCAGAC TATTACAGCC CCAGTGTATT GCAGACAGTC
CTGTTTGACA AGCTGTATGC CGATGTCCTT AAAGAAGGCG TAAAACAGAT TGAAGACAAC
ATCTTTTCCA ATATAGACAA AAAGCATGCT GCCTTTGAGG AAGATCCATA TACTCCCACT
TGGGAGACTC GTCTGGATTC CCTAGATGCA GGCTATGCCA TGGATTTCCC GCCTGAGGAA
ATAGGCGGAC CCGTATTCCA GGGATTAAAG CTACAGGGTG CTGAGGCCTT TTCAGCGGTG
CTAACCCAGG ATTCCTTTAT AGCCGGCGAT ATTGACTCGG CAGTTTCTCG GCAGGTCTTT
GAAATGTTAA AGAAAAACAA AGTTCTGGAC GAACAGGGAG TTTTAAGTAG CAAATTCAGC
ATTGATACTG ACCTTGACTT TTTATTCAAA GAAAAGCCAA AAAATCTCAA GAGATACCTT
ACGGAAGGGG TTCGCTATAT GCTTATGCAT GAACATGCTA AAATCCGCCT GACCTTCAAT
TTACCGATGT CTGCAGCAAG GGTATCTGCT GTCAGCAACT ATGAGCTAGA GCCCGAAACC
AGTATTTTTC ATGCCGAAGT AGATGAAAAG GATGCCTCTG TCCTATGGCT GGCAGCTCCA
TTACAGAGAG ATAAAGAATA TACTTTGACT GTTTCCAATT ATTTTACATC CCAGGACGGA
TCGACTCTTG ACCCTAAATA TAATAGCATC AAAGTTAAAC TTAGTTAG
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| Protein sequence | MGWENCVANI RTTLDRNAKE VNEVNWSAID QDALDNDTFR NGSPFSLICP SRHCTDFADI
SPQAHRICRC EDMNGNPIPN CEPKDYLYPY PSQVCLNIDN PSDYSGKRSR ACTRQGDSYY
QLTCHCCCSC FAYGTKIGTP NGHKKIEKFA VGDLVLAAGI ETSAGGIKLN WSPLKVSFSS
GTGPDSHQPA MVYIRHGDTG SIIVTPDHLF LMPNGKLKRA DRLVPGKDQL VSYEGRPVPV
HEVSIGEYEG GVHHIATQKN FTGDLDGHLL LSEGVVSGDF NLQIHATELK EKYFIVDHDS
YPQIGTKEYI EQNNELVQGS YLNFQVAGLN ESNTAPQPLK YFVHGQKVSY IPETAAKYLS
SLQEIDVNDN AEKRSFSEMN MGNAAVNYVL KLFRGFYSNI IFHHDIARLE PNAYAFNQYG
KDIVVLSGGL SRIKNLQMEG LAVILSHMVT RLQKSDPLDY NGYTSVAMAD YYSPSVLQTV
LFDKLYADVL KEGVKQIEDN IFSNIDKKHA AFEEDPYTPT WETRLDSLDA GYAMDFPPEE
IGGPVFQGLK LQGAEAFSAV LTQDSFIAGD IDSAVSRQVF EMLKKNKVLD EQGVLSSKFS
IDTDLDFLFK EKPKNLKRYL TEGVRYMLMH EHAKIRLTFN LPMSAARVSA VSNYELEPET
SIFHAEVDEK DASVLWLAAP LQRDKEYTLT VSNYFTSQDG STLDPKYNSI KVKLS
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