Gene Dred_0998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0998 
Symbol 
ID4956141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp1052225 
End bp1059901 
Gene Length7677 bp 
Protein Length2558 aa 
Translation table11 
GC content44% 
IMG OID640180168 
ProductYD repeat-containing protein 
Protein accessionYP_001112358 
Protein GI134298862 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3209] Rhs family protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAAATA AAATAAAGAG TTTTACAAAC CAAAAAGATA AAAGCAAAAT ATCCTTCACC 
GAACTGTCTC TGCCCAAAGG GGGAGGAGCC ATTAAAGGAA TTGGTGAAAC CTTTCAGCCT
GACCCTTTCT CTGGTACTGC CAACCTTTCC ATCCCTGTTC AAATGTCACC CTGCCGTGAT
TTCGAGCCGA AAATAAGTCT AAATTATAAT TCGGGGACAG GCAATGGCAT TTTCGGAATC
GGTTTCTCTA TTTCCATTCC CAACATTTCA AGGAAAACCG AAAAAGGAAT TCCAAGGTAT
AACGACACAG ATACTTTTCT TTTCTCAAAC GCCGAGGATC TTGTATCTAA AATGGTAAAG
AACCAAGAGG GAAGCTGGGT CAAGGAAGAA AGACATGTGG AAGAAAACAG AGTCGGTTGG
AAAGTTCTCT CATACATACC TAGAATTGAG GGACTGTTTG CCCAAATAGA ATACTGGCAG
AATTCCTGGG AATCATTTTG GAAGGTAACC ACCAAGGACA ATACAACCTC CATTTATGGG
CAAAGCGAAA ATGCAAGAAT AGCAGACCCT CACGACAATA CTCGCGTTTT TAAATGGCTT
ATCGAAAAAA CCTACGATGC CAAAGGAAAT AAGATAGAGT ATTTTTACAA ACAGGAAGAT
AATGAAAATG CGCCGGACAA TATCTGTGAA AAGAACCGGA CATACGCAAC AAATAAATAT
GTAAGCAGCA TTAAATACGG CAACTATTTG GATGGCAAAG GTGAGGAAGC CTGGGCATTC
GAAGTGGTTT TCGATTATGG ACAATACGAT ATTTCAGACC AATACTTAAG CCAGCCCGGT
TGCAACCCTT ACATTCCTGC CAGGAAGTGG CCTGCCAGGC AAGACCCCTT TTCCTCTTAC
CGAAGCGGGT TTGAAATACG TACCTTGCGT TTGTGTCGGA ATATTCTAAT GTTCCACCAT
TTTAAAAAAG AATTGGGAGA AACACCCTGT CTAGTCAAGG CCACCCAACT GACATATAGG
GAACCAGCGC AACAGTTACA GAATAGTAAC AACCCTTTTA CCAAAATACT TCAGCTTTCC
CAGGTAGAAT TGAAGGGTTT CAAAAGGAAA GAAAACGGCA GTTATCAATT TAGATCCATG
CCGTCGCTTA AGCTTACCTA TTCATGCCTG ATGCCGGCAG GTGGAAAATT CGATACTTTG
AAAGTTGGGA ACAGTACGGC CGTGCCCGTA AGTACAGGGC AAATACGTTA TAATTTTGTA
GACCTTTATG GAGACGGCAT CCCAGGCCTT TTATACAGCG ACGATAAGGC CACGTTGTAT
TGGAAGCCCA AAGGTAATGG TGAATATGAG TATCCCGAAC CAGCTGCACA ATTTCCCATT
GAAAAGGATT TAAAAAAAGG CGAATACACC TTGGTGAGCC TTGAGGGCAA TGGCAGGCTT
GACCTGGTGG TGGGTACCCC GCAAAGGGGC GGCTTTTATG AAGGTAATCC CGATGGTTCT
TGGCATTCTT ACCGAGATTT CGCAACCTAT CCCCTGGATT TCACTAATTC CCATAAAGAG
ATGATCGATA TGAACGGAGA TGGTCTGGCA GATCTCTTGC TTTACGAGGA TAATACCGCA
AAGATTTATC CTTCATTGAA GAAAAAGGGT TACGGTATTC CTACAAGGGC CAGTCTGTCA
GAGGATTATC CCACAACAAG CAACGGATAT GCAGAAGAAG TCTTAAGTTA TGCCGATATG
TTTGGCGACG GCATGGCGCA CCGAGTAAGA ATCCGTAACG GCAGCGTTGA GTGCTGGCCC
AATCTTGGGC ACGGACGCTT TGGTAAAAGG GTATTGTTTG CAAATGCACC GCGTTTTGGG
GATACTCTGG ACGCTTCACG CCTGTTTCTT GCAGACTTGG ACGGTACCGG TATGACAGAT
CTCATTTATG CTTATCCAGA TAAAGTTCAG GTTTTTTTTA ACCAGGGCGG CAACAGTTTT
AGTCCCCCCC TATCCATACC TCTGCCTGAA ACATATAGCA ATCTGGACCA GCTCGGTTTT
GCCGACGTGA AAGGTAATGG GACTGCCTGC CTGGTTTTTA TTAAAACAGG CGCCAATGCA
AAGCAATACT ATTATGATTT TTCTGAAGGA ACAAAGCCCT ACCTTTTAAC CGGCATTGAT
AACAATCTGG GGGCGTTAAC AAACATAAAA TATACCAGCT CGGTAAAGTA TTATCTGCAT
GATAAAATGG CGGGCAAGCC ATGGAAAACC AAACTTCCTT TTCCCGTCCA GGTGGTGGAA
AAAGTAGAAA GCATAGACAA AATTTCTGGT CTAAAGCTAA CAACCCAATA CAAATACCAT
GACGGCTTCT ACGATTCTGT GGAAAGGGAA TTCCGAGGCT TTGGCTTTGT GGAGGAAACG
GATAGCGAGG ATTTCTTTAC TTATGCGAAA CCCGGTCTAC TTGAGAACGT TGCATTTTAT
GGCCTAGAAG AGGAACACCA TGTGCCGCCT GTCCTGACAA AAAGGTGGTA TCATATCGGA
GCCTGCATTG AAGAAGGGGT TGTGTCAAAA CAGTGTGAAA AAGAATATTA CCAGCAGGAT
AAAAGGGGCT TTTCAATACC CGATAGTACC TTTGATGATG TTGTCCGACA AGGTTGCGCC
GAAACCCTAA GGCAAGCTTA CAGGGCACTG AAGGGCCAGG TTATTCGAGA GGAGGTATAT
GCCCTTGATT ATATTGAGGG TCGGACGGGC CATCCCTATA CAGTAACCGA AACAAATTTT
CATGTAAGGC TAATACAGCC ATTAATAGGT GAGAATAGGG CAGTGTTTTC TGTTTATAAA
AAGGAAACGG TTAGCTTTAA TTATGAGCGT AATCCTAACG ACCCGCAGAT ACAGCACGAA
TTTATTCTTG CTGTGGATGA CTTTGGTAAT GTAAAAAAGT CCTGTCGTGT GTTTTATCCC
AGGCGCGCCA CCCCCAAGGA CGCAGTTTCG GTAGTTCATC CAGAACAAAC CAAAATCAAA
GCAATTGTGG ATTTGCACTC TTTTATTAAC AACAGTTTGG ATTTTTGGTT GTTAGGCATT
TCCTACGAAA GCAAAACACT GGAAATTGGC GCTTTGGATC TACAGGGACA AGCTTGTTTT
AGCTTTACAA AAATAAAAGA CCAGGTTGGC CGGGCCTTGC AAAACTGTAT TAGAAACGAT
GAGAAGTTTT CTAGTGACAA AGTACAGGCC AGACTGCTTT CCTGGGAAAG AAATTATTTC
TGGAATGAAG CCCAGGATGC ACCTCTCCCC CTTGGGCAAA TTACAGACAA GGCATTGTTG
CATCACTCTG AAGAAGCGGT ATTCTCTCAG GAACTGCTAA ACACAGTATT TAATGGCAAA
GCGACCATTG ATATGCTGGA AAAGGAAGGA GGGTACGCCT TTCAAGAGGG ATATTGGTGG
AACAGGGGTC TGGTCCAGCA TTATTTGAAG GACAGATTCT TGTTGCCGTG GAAAACAGAA
AATTCTTACA CTTCTTTCCC TTCATCCCTG TATGCTAAAG CAGTTTATGA ATACGACCAG
TATAGCCTTG CTCCTGTTAA AGCAACCAAG TTTATTACTG ATAAAATAAC AAATACTTCC
AGTGCTTTGC TCGACTATAC CATACTATTG CCCGTACAAA TCACAGATAT CAACGATAAC
GTCTCCCAGG CTTTTTTTGA TCCTTTGGGT ATGGTTATCG CCACATCTGT TTTTGGTACA
ATGGGCGGTA AACCAGCGGG AGATAGAGAT TTAAAGGAAT ACAAGGCAAT TCCCCAGGTG
GACACGACAT TTGACGATGT GCTTGCCAAT CCCCATAAAT ACCTGCAGGA TGCCACGACC
TATTTCTATT ACGATCTGTC TGCCTGGAAA AACAAAGGTC AGCCAGCTCG TTCAGTTCAG
TTGACCAGGG AAACCCACGT CAGTGACCTA GCCGCTGGTG AAAAAAGTGG TATGCACATC
CAAATAAACT ATAGTGACGG ATTTGGCAGG GAAATTGAAA AGAAACTTAA GGCTGATGCA
GGGGAAGCTG TTTTAAGGGA TAATGCAGGA AAACCCGTTT ACGATGCAGC GGGCAAAATT
GTTAAGGATT TTGCCCAGGA TCGCTGGATT GTATCTGGCA GAACCGTTTA CAACAACAAA
GCCAAGCCTA TAAAGCAGTT TATTCCCTAT TTTTCAGCCA CGCCAGATTA TGAACTGCAG
AAGGACATCG ATCCCATTTT GCCCAAGCCC ACAATAATTT ATTACGATCC TTTGCTTAGG
GTGGTAAAAA CAGTGAATCC CAAAGGATTT TTTTCCAAAG TAGAATTTAC GCCTTGGGAG
GAAAAGCATT TTGATGAAAA TGATACGGTA AGAGACAGTG TTTATTTTAA AAATTTTAAG
GAAACTTATT CCAAAGACCC ATCACAGGAG CAAAGGGATG AAAAGGATGC TCTGGATAAG
GCTTCCCGTT CTTATAATAC GCCGGATACA AAGGTTTTGG ACAACACAGG TCAGACTTTC
CTGGAAATTC GCAATAACCT GGGAGAGATA ACGAAAGATA TCCTTCAAGA TATCGTCAAA
GGGACAGAAG TAAATTGCCA AGAGTTGTGG GATGAACTTA AATCAAAAGG ATATATTGAA
ACTGGTGACC CACCTTCGGC AATGGGTTGG GTGTCGGGCA AATTTCGTCC CTATTTTAAG
GGGTTTATGT TGGGGCTAGA TGGCAGGTAC AAACAGTTTG AAGAAAAAAT TATAAATTTG
TTGAAAGAAA ACTGTCTTAC CACTTATCAT GAATTGGATA TTCAAGGAAA TGTTCTCTTC
TCTGTTGATC CGCGACTTTA TTACTCCAAC CTGAAGGATC ATACGGACTA TTACAACTTC
AAATATGTTT ATGACATGCA AAAAAAACCT CTCTCCGTAG ACAGCGCCGA CGCGGGTCTA
AAGTTAAGTT TGTCCAACAT CTTTGGTAAT ACAGTTCATT CCTGGGATAG CCGCGGTTTT
CATACAAGAA AAATGTACGA CAGTCTGCAA CGTTGTGTTC AGATTGGCGT TGAAGGTAAC
GACGGACGAG GTCTTGTTTT GCATCAGGCG GTTGAAAAGT TTGTTTATGG AGAATTTTAC
GAAGAGAAAG AAGAAGCTTC AAAGGATAAG AATTTGCGGG GTCAAGTTTA TAAACATTTT
GACCAGGCCG GCGTTGTAAC TTGCAATCTC TATAACCTGA AAGGTAAGGC AGTGCAAACG
GACAGGCAGT TTCTGGCCGA TTATAAAAAG GAAGCTAACT GGGATAATGT GAATAAATCC
AGTCTGGCAG ATGAGCTATT CAGCATTGGC TGCTCCTATG ATGCCCTTGA AAGAGTTATT
TCAGAAACAG CTCCTGATGG CAGCATTTAC ACGCATATTT ACAATCAAGC TGGTTTGCTC
CGGAAAGTTG TTGTGGCTTT CAAGGATGGC AGCGAAGAGG AGTTTATAAA GGACATCCAA
TACAATGCCA ATGGCCAGCG TCTTAAAATA ATTTATGGGA ACGGTGTGAC AACAGAATAT
TCTTATACAG ATCCGGCCTT GCGTTTAACC GATATTTTAT CATTGAAACC AGATAGTAAT
AACACAAAGG ATTTCAAGGG TTGTCTCCTG CAAAAAATCC ATTATACCTA CGATCCGGTG
GGCAATGTTA CCAGACTGCG GGATAACTCA TACCCCACTG TTTTTTACAA TCAGCAAAAA
GTGGAGCCCT TGAGCGATTA TTCATACAAC CCTTTATACC AGTTGGTCAG TGCCACAGGC
CGCCAGCATC CCGGTATTTT TGACGGGAGT CACAGAGATG GGTTTAAACA AAGCAAATTT
ATACCCATCA AGTCTTCCAA CCCCAATGAT GGTACAAGTT TGGAGAACTA CCGCCAGGAC
TATCAGTATG ATGAGGCAGG AAACCTGACA AACATAAGGC ATATTTCGTC ATCGACCTCA
TGGACAAGGC AGCTTGACAT ATCGAAGGGT ACCAACCGTA CTGTTCAAAT TGCTTCGTTA
AACGGTGCAA AGAATTTCTT CAAAACGGCA TACGACCCCT GCGGCAACAT GCTAAATCTG
GAAAACCTGG CCAGTATAAA CTGGAGCTAT AGAAATAACC TGTCTAGAGT GGACGTTATT
TTAAGGGAAA ACAACAGTTC AGACAGCGAA TATTTTATTT ATGACAGCAG TGGACAGCGG
GTTAGAAAGG TGAGCGAACG CAAATGCGGC TCCCTCAGGG AAATAGAGGA GAAGCTTTAT
CTTGGTAACT TTGAAATTAA ACGCATTAAA AAGAAATCGG ATCATTTGGA ATCGCAAATA
CTGGACAGAC AGTCCCTTCA TATTATGGAT GGCAAAAGCC GCATAGCCAT AACCGACATT
TGGCTCAAGG ATGACTTAAA TCGGGAGACC GAAAAAACCA TGGAGCGCAA GTTCCGCTAT
CAATTGAATA ACAACTTGGG TTCAGCTTGC CTGGAAGTTG ATGAAAAGGT AAACATAATA
AGCTGCGAGG AGTACTTTCC CTACGGCGGC ACTTCTTTCA TTGCCGGAAG GGATAAGAGG
GAAGTCAAAC TGAAGGAGTA CCGTTACTGC GGCAAAGAAA GGGACGACTC CACAGGCTTT
TATTATTACG GTGCCCGCTA CTACCTGCCC TGGTTGGGCA GGTGGATCAA TCCCGACCCA
GCTGGAACGG TGGATGGGCT TAACCTGTAT TCCTTTGTAA AGGGAAATCC TGTTAACTTT
ATCGACACAA GCGGTAAGGT AGGCGGTTCC TGGTTGCACT TGCTCTATGG AGGTCTCACG
GCCCTTGCGG TTGGACTGAT TGGTGGGGCC GCCGTAGGTA CGGGGGACTA TGCCTCCCCG
GTTGTGGCCG CCCTGGCAGG CTTGGCCGGT ATGCTTTTTA ACAAAGATAA AAGTGCATTA
GGTGCTCTGG CCATTGCTGG GGCAGGTGCC ATAGGTTCAG CCGTTGGCGG CTATGTTGGC
AGGGGGACGA TGTCTAAATT AAAAGAAAAA GACTGGCAGA CCACATCTGT GGCCAGAACG
GGCCTAGTGG CCTCCGGCTT AACCGGGGGA ACAATCGGTT CCCTGGGAGT ATTGGCTGTA
CAGGCAGTCA CCAGGCAGTT TAATACCCAT AATATCCTAA TGGGAGCCAT TGCAGGTTTT
GGCGGGGGAA TTCTGGCTTC GGGTGCCCAA TTTGGTTTAT TTAAGCCTGG CGATGCAAAA
GTGCCAACCA TGCCTGTACG AGCAGAATTA AAAGACCTAT TACCTTATCA AACCCGAGCT
TTTGATAGGC ATTACCTGGA ACTTAATCCT AATCCTGAAG AATTAATTAC CAATCTTAAA
CCAAAACACT TTACAGTTAT TGACGAGGAA ACACAGCAAA GGGTCAAGTG CGACTTAGTA
GCAGTCCATG GATATCCGCG ATTCTCCTTT GTCCAATCGG TGCATGGCGA TTACAATCAG
TATATTGATA AGGAAAAACT GGTCCAACTT TTGCAGCAGG CTGGTTTTCC CCATCAGGAT
TCAACCACAG GAAAAAATAT ACCCATTAAA CTTGCTACCT GCTTTGGTGG TTTCTGGGAG
AGCTGGTTCA GTACAGCGCA GTTGGTTGCT GACAAGCTGG GGACGGAGGT GTATGCCCAC
CGCTGGCCGG TCACTGTTGC CCAACAGAGT CCATGGAAAA AATTTACTCC TAATTAA
 
Protein sequence
MGNKIKSFTN QKDKSKISFT ELSLPKGGGA IKGIGETFQP DPFSGTANLS IPVQMSPCRD 
FEPKISLNYN SGTGNGIFGI GFSISIPNIS RKTEKGIPRY NDTDTFLFSN AEDLVSKMVK
NQEGSWVKEE RHVEENRVGW KVLSYIPRIE GLFAQIEYWQ NSWESFWKVT TKDNTTSIYG
QSENARIADP HDNTRVFKWL IEKTYDAKGN KIEYFYKQED NENAPDNICE KNRTYATNKY
VSSIKYGNYL DGKGEEAWAF EVVFDYGQYD ISDQYLSQPG CNPYIPARKW PARQDPFSSY
RSGFEIRTLR LCRNILMFHH FKKELGETPC LVKATQLTYR EPAQQLQNSN NPFTKILQLS
QVELKGFKRK ENGSYQFRSM PSLKLTYSCL MPAGGKFDTL KVGNSTAVPV STGQIRYNFV
DLYGDGIPGL LYSDDKATLY WKPKGNGEYE YPEPAAQFPI EKDLKKGEYT LVSLEGNGRL
DLVVGTPQRG GFYEGNPDGS WHSYRDFATY PLDFTNSHKE MIDMNGDGLA DLLLYEDNTA
KIYPSLKKKG YGIPTRASLS EDYPTTSNGY AEEVLSYADM FGDGMAHRVR IRNGSVECWP
NLGHGRFGKR VLFANAPRFG DTLDASRLFL ADLDGTGMTD LIYAYPDKVQ VFFNQGGNSF
SPPLSIPLPE TYSNLDQLGF ADVKGNGTAC LVFIKTGANA KQYYYDFSEG TKPYLLTGID
NNLGALTNIK YTSSVKYYLH DKMAGKPWKT KLPFPVQVVE KVESIDKISG LKLTTQYKYH
DGFYDSVERE FRGFGFVEET DSEDFFTYAK PGLLENVAFY GLEEEHHVPP VLTKRWYHIG
ACIEEGVVSK QCEKEYYQQD KRGFSIPDST FDDVVRQGCA ETLRQAYRAL KGQVIREEVY
ALDYIEGRTG HPYTVTETNF HVRLIQPLIG ENRAVFSVYK KETVSFNYER NPNDPQIQHE
FILAVDDFGN VKKSCRVFYP RRATPKDAVS VVHPEQTKIK AIVDLHSFIN NSLDFWLLGI
SYESKTLEIG ALDLQGQACF SFTKIKDQVG RALQNCIRND EKFSSDKVQA RLLSWERNYF
WNEAQDAPLP LGQITDKALL HHSEEAVFSQ ELLNTVFNGK ATIDMLEKEG GYAFQEGYWW
NRGLVQHYLK DRFLLPWKTE NSYTSFPSSL YAKAVYEYDQ YSLAPVKATK FITDKITNTS
SALLDYTILL PVQITDINDN VSQAFFDPLG MVIATSVFGT MGGKPAGDRD LKEYKAIPQV
DTTFDDVLAN PHKYLQDATT YFYYDLSAWK NKGQPARSVQ LTRETHVSDL AAGEKSGMHI
QINYSDGFGR EIEKKLKADA GEAVLRDNAG KPVYDAAGKI VKDFAQDRWI VSGRTVYNNK
AKPIKQFIPY FSATPDYELQ KDIDPILPKP TIIYYDPLLR VVKTVNPKGF FSKVEFTPWE
EKHFDENDTV RDSVYFKNFK ETYSKDPSQE QRDEKDALDK ASRSYNTPDT KVLDNTGQTF
LEIRNNLGEI TKDILQDIVK GTEVNCQELW DELKSKGYIE TGDPPSAMGW VSGKFRPYFK
GFMLGLDGRY KQFEEKIINL LKENCLTTYH ELDIQGNVLF SVDPRLYYSN LKDHTDYYNF
KYVYDMQKKP LSVDSADAGL KLSLSNIFGN TVHSWDSRGF HTRKMYDSLQ RCVQIGVEGN
DGRGLVLHQA VEKFVYGEFY EEKEEASKDK NLRGQVYKHF DQAGVVTCNL YNLKGKAVQT
DRQFLADYKK EANWDNVNKS SLADELFSIG CSYDALERVI SETAPDGSIY THIYNQAGLL
RKVVVAFKDG SEEEFIKDIQ YNANGQRLKI IYGNGVTTEY SYTDPALRLT DILSLKPDSN
NTKDFKGCLL QKIHYTYDPV GNVTRLRDNS YPTVFYNQQK VEPLSDYSYN PLYQLVSATG
RQHPGIFDGS HRDGFKQSKF IPIKSSNPND GTSLENYRQD YQYDEAGNLT NIRHISSSTS
WTRQLDISKG TNRTVQIASL NGAKNFFKTA YDPCGNMLNL ENLASINWSY RNNLSRVDVI
LRENNSSDSE YFIYDSSGQR VRKVSERKCG SLREIEEKLY LGNFEIKRIK KKSDHLESQI
LDRQSLHIMD GKSRIAITDI WLKDDLNRET EKTMERKFRY QLNNNLGSAC LEVDEKVNII
SCEEYFPYGG TSFIAGRDKR EVKLKEYRYC GKERDDSTGF YYYGARYYLP WLGRWINPDP
AGTVDGLNLY SFVKGNPVNF IDTSGKVGGS WLHLLYGGLT ALAVGLIGGA AVGTGDYASP
VVAALAGLAG MLFNKDKSAL GALAIAGAGA IGSAVGGYVG RGTMSKLKEK DWQTTSVART
GLVASGLTGG TIGSLGVLAV QAVTRQFNTH NILMGAIAGF GGGILASGAQ FGLFKPGDAK
VPTMPVRAEL KDLLPYQTRA FDRHYLELNP NPEELITNLK PKHFTVIDEE TQQRVKCDLV
AVHGYPRFSF VQSVHGDYNQ YIDKEKLVQL LQQAGFPHQD STTGKNIPIK LATCFGGFWE
SWFSTAQLVA DKLGTEVYAH RWPVTVAQQS PWKKFTPN