Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_0976 |
Symbol | |
ID | 4956864 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | + |
Start bp | 1031799 |
End bp | 1034537 |
Gene Length | 2739 bp |
Protein Length | 912 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640180146 |
Product | TRAG family protein |
Protein accession | YP_001112336 |
Protein GI | 134298840 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTTCAAC AAGTAGGAAA CAAGTCGGTT GAACTACTCA ACCGAGGCAG TGAGCTTATT ATTAACCGCA TCCCCGAAGG ACGTTTCAGA GACTGGGTAA ATAACCATCA AAAAATTGCC CTTGGACTAG CCTCTTTGCC AATAGTGGTA CCTGTCGGGT ACATCCTGGA TGTCTCGAGC ATTGGCAGAA TGGCCGGCTG GATCTATGAC ATAGGAGTGC AGCTGCAAGG TGTATCCATA TTTTCCACCC CGGAACAAAA GGCTGCAGCT GCTCAGTGCA TTAAAATGGG CAGTTATATC TCAAACCACA CAGGTGCAGT AACCCAAGCC TGGTTGACGG GCAGCTATGA ACCAGGAATG CCGGTAAAGG AGCTTGAGAC AATCAAAGAG TGGTGGCAGT GGGGTAACCT AGCCCTTATG GCCACAATAC CCTGGGTCTG GTGGAATTTT CAATGGGGTT TACCCAAACA CAGCTCTACT AGGGTTCATG GCCTAAGAGT TGTAGATAAT GCAGCCTTCG GTACCAACAG ATGGGCTGGT GTAAAAGACC TTAAAAACTT CTGTGAACTT GGCCCACCGG TACACCTGAA AAAAAACAAG GACAATATAA TCAAGTTTCC CGGTGGCAAC CTGATTGGTG AGTTAGAAAG AAAAATAATC AGGGTCAACT TTGAAAAAGT ACCCGACGAC ACTCCCAAGA CAGCACCCCA CCTTTTAGCC TACGGTGGTA CCGGCGCTGG TAAATCCTAC AGCCTTGTAT CAGGAAATAT CATTTCTGGT GTGTCGGATG GACAAAGCCT AGTATTAATT GATCCAAAGG GGGAGTTGTT CAAAACCTTT GCCAAATGGC TAAATGCCAT GGGGTATGAA AATGTCTGGG CACTAAACTT TATGACTCCC CAGCACAGCC ACCGTTGGAA CTCCGTTATT GAATGCCAAG ACGATGCTGA AATTTCCGAA ATGGTTGACA CCCTTTCCAT CAATACCGTT GGCCCCAATC CAAGCTATTT TCAACTAAAG GCCATGGAAC TGATGGAGGC AATTATTGGC CTCCTCAAAG GGGATTTTCC AGTAGAACAA CAGCATATGA GAGCCATAAA CACACTGGCA GCCTGGCCCC TAGAGAAACT AGATGCACGT TTTAAGGAGG CCTACCAGGC AGAAAGAATA AGTGCCACCA TCTACGAAAG ATGGCGGGGC GTAGCAAAGG AAAACTACGG ATACGCCGTT TCTAACCTCA CGGCGGTGCT AAAAAACTTA ACAACTAGCC CACTGGCAGC CTTAATGTCC GAAAAGGAAA TAGATCTAAG CGAAATAGGG AGAAAAAAGA CCGCCCTTTT CCTGATCATT CCCACCGGTG GCGAAGGAGT TTATCTAAAA CCAATCCTAT CCATGTTCTA TAAATTCCTC TTCAAGAGAC TAGATAAACT GGCCTTTACT AGCCCCGGTG AACGACTTCC GGTACCGGTA AGAAACGTTT GGGATGAAAT GGCCAACGTA GGGGTTATTC CCGGTTTACC AGAGATTATT AGTACCGCCC GGAGTAAAGG GATTCACATA ATGATGATCT TACAGACCCC AACACAACTA GAATCTCTTT ACGGTCGAGA TGATGCTAAA ACCATCACGG GAAACTGCCC TACGGTAATG ATGATTGGTA TTGCTCCGGC GGATCGTGAC CTAGCTAAGA TGTTTAGCGA AATACTGGGT ACCGCAGCTG TTGAAGCTTA CAAGGTAAGT GAGGACAGGA CAGTACCAGG AAAGCATTGG TTTGAGTTTT CCAAGAAAAC GAAAACAGTT ATTGAACGCC CACTAATGAC CATGTCGGAG ATCTTTAAGA TTGATCCTAG ATATTGCATT GCCCTTCTTC AATGGAGTAA CCCGGTATAT CTAAAAAAGG TAGGGTGGAC AAAACTACCT CAGGCTAAGG ATATAAGGCG TTGCGGAATG CTGCCAATAA AAGAATATAT TCCCGCCAGG AGTTTTGATA TTAGCCTACC AGGGGATGAC ATCCTCTCAT CCAATAACGA AGAATTAAGC CTAGCCTTTA TAAATCAAGA TGAACAGGAG ATTCCTAGCC AGAAGGTTGA ACTATCAAAA GTACCAGGTA CTAAGCCTGA GAAAGAATTT ATTTCAACCA AGGGAGAGAA AATTATTTCC TTGGGAAGCT TCTTAAATAA CTGGGAAAAG GCTCCCCCCG ATAACAAGCA AATAAATGGG GACACTCCAA CTGCTGTAAC GAATGAAATA GAAGTTACTG CACCAGGTGC AGCACCTCCT ACTGCATCGG AGCAAATCAG TGGAGATATT GTTGAAATAA CCTGGAATGA AAATAAACAG GAGGAAATGA TTCAAGAAGA TCCGTTAAAT CCGCCAGATG AAAATGAGCT GGTTATGTAC CAAGGGGATT TTACAGATGT TATTCCGGAG GATTTATCGG AACAACTTCT AGAGAATACC GGAGGTGCTT TTTTTATACC TGACATTTCA GAAAATCAAC CAGAAGATCA ATTTCTGGGG GGAGGGGAGG AAGAAGTATC AGCCGGTGAC CTTCCAATAA ACACTGGTGA AAATTCAGTA ACTTCGGAAC CAATGACACA AGATGAATTT ATCGCCCTGA CAGGGGCGGC ATTAGAACAT AGTCGTGAGA ACTTAACTGG AGAAATTGTC AATGAATTGC CGGTGGAAGA CGAGATATCA GTCCCGGCAA ATGCTAAATC AATAAATTGC TCCTGGTAA
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Protein sequence | MLQQVGNKSV ELLNRGSELI INRIPEGRFR DWVNNHQKIA LGLASLPIVV PVGYILDVSS IGRMAGWIYD IGVQLQGVSI FSTPEQKAAA AQCIKMGSYI SNHTGAVTQA WLTGSYEPGM PVKELETIKE WWQWGNLALM ATIPWVWWNF QWGLPKHSST RVHGLRVVDN AAFGTNRWAG VKDLKNFCEL GPPVHLKKNK DNIIKFPGGN LIGELERKII RVNFEKVPDD TPKTAPHLLA YGGTGAGKSY SLVSGNIISG VSDGQSLVLI DPKGELFKTF AKWLNAMGYE NVWALNFMTP QHSHRWNSVI ECQDDAEISE MVDTLSINTV GPNPSYFQLK AMELMEAIIG LLKGDFPVEQ QHMRAINTLA AWPLEKLDAR FKEAYQAERI SATIYERWRG VAKENYGYAV SNLTAVLKNL TTSPLAALMS EKEIDLSEIG RKKTALFLII PTGGEGVYLK PILSMFYKFL FKRLDKLAFT SPGERLPVPV RNVWDEMANV GVIPGLPEII STARSKGIHI MMILQTPTQL ESLYGRDDAK TITGNCPTVM MIGIAPADRD LAKMFSEILG TAAVEAYKVS EDRTVPGKHW FEFSKKTKTV IERPLMTMSE IFKIDPRYCI ALLQWSNPVY LKKVGWTKLP QAKDIRRCGM LPIKEYIPAR SFDISLPGDD ILSSNNEELS LAFINQDEQE IPSQKVELSK VPGTKPEKEF ISTKGEKIIS LGSFLNNWEK APPDNKQING DTPTAVTNEI EVTAPGAAPP TASEQISGDI VEITWNENKQ EEMIQEDPLN PPDENELVMY QGDFTDVIPE DLSEQLLENT GGAFFIPDIS ENQPEDQFLG GGEEEVSAGD LPINTGENSV TSEPMTQDEF IALTGAALEH SRENLTGEIV NELPVEDEIS VPANAKSINC SW
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