| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_0967 |
|---|
| Symbol | |
|---|
| ID | 4957134 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | + |
|---|
| Start bp | 1022221 |
|---|
| End bp | 1023195 |
|---|
| Gene Length | 975 bp |
|---|
| Protein Length | 324 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 640180137 |
|---|
| Product | phage integrase family protein |
|---|
| Protein accession | YP_001112327 |
|---|
| Protein GI | 134298831 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCAATT ATCTAGTGGA CCAAATATTA GGAATATGCG GCACTAATGC GGAAGGACAA
GATGATGTTG AAAAACAGCT TCGAGAATTA CTGAATGGTT ATGTAATAAA AAAAGCTTCA
CCTGATAGCA ATCTGGCAGA TGCTAACCAA AAACTTAACA TGTTTTTATT GTCCAAAAAA
ATGGAGGGGC TTAGCGAAAA AACAATTGAT AAATATCGCA AAACTATCCT GGACTTTGCA
AAATACGTTA ACAAACCTCT TAAAAGAATT ACCACTGCCG ACATTCGCAC TTGGTTATCC
AACCGGGATA TAAAAATAAG TACTGTCCGG TACCGTCTGG CGGTGTTGAG AAGTTTTTAT
AATTACCTGT TAGCTGAAGA AATAGTTGCT GTTGACCCGA CAAGAAGAAT AAAGTCGCCA
AAACTTGAAA AGCGTATTCC AAAGGCCCTA AATAATGATG AACTGGAGGT CTTAAGAGAA
GGTTGCAATA CTTTACGTGA AAAGGCACTT CTAGAAATCT TTTATGCAAC AGGTTGCCGT
ATTGGGGAGG TGTTCGGGGC GAATAAAATA GATATAAATT GGCAAGAGCG GAGTTTGGTA
GTATTGGGCA AAGGGAACAA AGAAAGGATC GTTTTTATCG GGGCTAGAGC AGCACACTCA
TTAAAGAAAT ATCTCAATAG TCGGCAAGAC AATGAAGATG CCTTATTTGT TACAGAAAAA
GGGAAAATCC AAAGGTTATC CGTACGTTCC ATTCAACTGA TATTTAAAAA AATTGCTAAT
CGGGTTGTTA TCCACAAAAA CATATACCCA CATATTTTTA GACATACCTT AGCAACTGCA
TTACTAAACC ACGGTGCTAG GCTTGAAGAC GTTCAGGACC TGCTAGGGCA TACAAATCCT
AGCACTACTC AGATTTATTG TAAAGTTTCA CCAGAGAGAA AGAAGTTAGC ATACAATCAG
CATTTTGTTA ACTAG
|
|---|
| Protein sequence | MLNYLVDQIL GICGTNAEGQ DDVEKQLREL LNGYVIKKAS PDSNLADANQ KLNMFLLSKK
MEGLSEKTID KYRKTILDFA KYVNKPLKRI TTADIRTWLS NRDIKISTVR YRLAVLRSFY
NYLLAEEIVA VDPTRRIKSP KLEKRIPKAL NNDELEVLRE GCNTLREKAL LEIFYATGCR
IGEVFGANKI DINWQERSLV VLGKGNKERI VFIGARAAHS LKKYLNSRQD NEDALFVTEK
GKIQRLSVRS IQLIFKKIAN RVVIHKNIYP HIFRHTLATA LLNHGARLED VQDLLGHTNP
STTQIYCKVS PERKKLAYNQ HFVN
|
|---|
| |