| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_0913 |
|---|
| Symbol | |
|---|
| ID | 4956172 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | - |
|---|
| Start bp | 972871 |
|---|
| End bp | 974535 |
|---|
| Gene Length | 1665 bp |
|---|
| Protein Length | 554 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 640180084 |
|---|
| Product | resolvase domain-containing protein |
|---|
| Protein accession | YP_001112274 |
|---|
| Protein GI | 134298778 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1961] Site-specific recombinases, DNA invertase Pin homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.955385 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAAGCAG CTATCTATTC AAGAAAAAGT AAATTCACCG GCAAGGGTGA ATCGATAGAA
AACCAAATCC AGTTGTGTAA GGAATACGCT TTTAATCATT TTAGTATTAA CGAAAATGAT
GTACTTATCT ATGAGGATGA GGGCTTTTCG GGGGGGACTA CGGACAGGCC CCAGTTTCAA
TTGATGCTTA AAGATGCAAA AAACAAGAAG TTTAGCACAC TTATTTGTTA CCGCCTGGAC
CGTCTCAGCA GAAGTGTGGT TGATTTTTCT TCAACTATGG AAGAGTTACA GCAATATAAC
ATAAGTTTTG TATCGATACG TGAGCAGTTT GACACTAGTA CCCCCATGGG AAGGGCTATG
ATGTATATAG CCAGTGTATT CGCCCAGTTG GAGCGAGAAA CGGCAGCAGA GCGTATCCGT
GACAATATGT TACAGCTTGC AAAGACCGGT CGTTGGCTAG GTGGTATAAC TCCTACTGGT
TTCGAGAGTG AACCTGTTGT CTACATAGAC CCAGCTGGAA AAGAAAGAAA AATGTATAGA
CTCTCCCCAA TCGCTGAAGA ATTTGAAATG GTAAAATTGA TATTTGATAA GTATTTAGAA
CTTAAATCCC TTACAAAACT TGAACAATTT TGCATTATGA ATAACTTTAA AAGCAAGAAC
GATGTGGATT TTAAAAGGTA CTCCCTCCGG TTCATGTTGT CCAATCCTGT TTATGCCATA
GCAGATAAAG AAATGTATAA CTTTCTTCTT GAAAACAGCT ATGAGGTTTA CTGCGATGAG
AACGAATTTA CCGGTGAATT TGGAGTTATG GCATACAATA AGACCCAACA AGATAAGAAA
AACCCTTCTT GTAGGTATAG AGACGTTTCT GAGTGGATCG TAGCCGTAGG TGCCCATAAG
GGCATCATAC CGAGCGCTAC TTGGATAAAG GCACAAAAAT TACTCCTGCA AAATAAGTCA
AAATCATATA GAAAGGTTAG AAACTCTTCT TGTTTACTTT CGGGACTACT TAAGTGTAGA
AACTGCGGAA GCTATATGAG GCCAAAGGTT AGTAGGCCAA ATAAAGATGG GGAAATTACA
TATTACTACA TGTGTGAAAT GAAAGAGCGT AGTAAAAGAA CCCGGTGCGA TGTAAAGAAC
GTCCAAGGAA ATAATCTTGA TAAAGCAGTC GTCCAGGAAA TAAAAAAATT ATCCATGTCT
GACTCTGAAC TGTACACTAC CATTCAGAAT GATAAATTTA CAATTCAAGC AGCTCAAAAC
ACCGTCGAAA ATGAAATTGC TCTAATTGAT GGGAAAATCA AAGCCAATGA GCAAGCCATA
AATAACCTGG TTACTTCCCT ATCCCAAGGA CAAAACTCTA CTGCAAGCAA GTACATCATC
ACCCAAATTG AAGAATTAGA TAAACAGACC GCTGAATTAA AAGGAAGATT GTTAAAACTA
AAAGAGGTCG AGGAAAATAA CCAATCGAAA GAGCAAAACC TAGATGTGAT GAAAAGCATC
CTCTCGGCTT TCAGTAAAAA CATAGATACC GTAGATATCG ATGCTAAACG AATGTTTATC
AAAAGCATAG TAGAGAATAT CGTCTGGGAC GGCGAAAATG TTGAAATGAA CCTATTTGGA
GCCAATTCAG AAAAAAAGCA ATTGCCGCCA ACGGAAACAA TTTAA
|
|---|
| Protein sequence | MKAAIYSRKS KFTGKGESIE NQIQLCKEYA FNHFSINEND VLIYEDEGFS GGTTDRPQFQ
LMLKDAKNKK FSTLICYRLD RLSRSVVDFS STMEELQQYN ISFVSIREQF DTSTPMGRAM
MYIASVFAQL ERETAAERIR DNMLQLAKTG RWLGGITPTG FESEPVVYID PAGKERKMYR
LSPIAEEFEM VKLIFDKYLE LKSLTKLEQF CIMNNFKSKN DVDFKRYSLR FMLSNPVYAI
ADKEMYNFLL ENSYEVYCDE NEFTGEFGVM AYNKTQQDKK NPSCRYRDVS EWIVAVGAHK
GIIPSATWIK AQKLLLQNKS KSYRKVRNSS CLLSGLLKCR NCGSYMRPKV SRPNKDGEIT
YYYMCEMKER SKRTRCDVKN VQGNNLDKAV VQEIKKLSMS DSELYTTIQN DKFTIQAAQN
TVENEIALID GKIKANEQAI NNLVTSLSQG QNSTASKYII TQIEELDKQT AELKGRLLKL
KEVEENNQSK EQNLDVMKSI LSAFSKNIDT VDIDAKRMFI KSIVENIVWD GENVEMNLFG
ANSEKKQLPP TETI
|
|---|
| |