Gene Dred_0873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0873 
Symbol 
ID4957315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp932800 
End bp934254 
Gene Length1455 bp 
Protein Length484 aa 
Translation table11 
GC content42% 
IMG OID640180045 
Producttransposase, IS4 family protein 
Protein accessionYP_001112235 
Protein GI134298739 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.446345 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGGTAT CACAATTTAT TACCACAAAT CAACTTGAAA CTTTGACCCG TCAACAACGA 
CGTGATTTGG AACGTAAATA TCAGAAGAAA TTACATTCTC TTCAACGCCT GACTAGCAAA
AGTGATCTTC CGATTAGCTT TGACAATACT TCTGTAACTG CTTATGGAAA TTTTGGCATA
CTAGAGGCGT TTAAGCAAGC CATTGATTTC AAGGGTATGC TTAAAGGGGT TTCCCTTAAG
CGACATCATA ACTGTAAATA CTCTGATACA GGGTTGTTAG ATACAATCAT TGATGCCCTT
TCCTTGGGAT TATTACGGTT TTCTCATATG AATGCTCTGC AAACTGACCC TGGATACCAG
AAAATTAAAG AAGTAACACA AGTGCCTGAC GAAAGCACTT TGCGGAACTT TCTATCTCTT
ATCTGTGAGC AGGAGGCATT AAACCAATTG CCTCTGGTGA ATCAGGAAAT GCTGTCCTTA
AAGGCCAAAT CCGATCAACC CCGTGAAGTC TGGCTAGATA TTGATGACAG TGTCCTCACT
GTTTTTGGGA AACAGGAAGG ATCAAAAGTC GGTTACAATC CTCGGTACCA CGGGAGGCCT
TCCTACAAGG TAAAGGTAGC ATTTATCTCT GGAACTTGCG AACTAGTCAA TGCCGGGTTA
TATAGTGGGA ACGTCGCCAG CAATGGCCAA TTTATGGAAT TCCTTAAAGA GACATTAGAG
ATCTTAGCTG CCCAGAATAT CCTCGTAAAA GGTATCCGCA TAGATAAAGG TTTCTTTGAT
GAGGATAACT TTGCCTACCT GGAAGAACAG GGCATCGAGT ATATTTGTAA GGCTAAACTC
ACCAGTAATA TGAGAAAGGT CATTAAATAC CTTGATGACC AGAACCAGTG GCAGTCTTTG
AGCAACCATT ATGCTGCAGC AGAAATCACC ATTCCATTAC CTAAATGGTC CAAAGCCCGC
AGGTTTGTAT TTATCCGTGA AACTCAAGAA CCTAAGGCAT GCGGCGATCA ACTTAACTTT
GACCTGAAGA CATTCGACTA CCAGGTGATA ATTACTTCTA GTGACGAGCA CAACCCAGAG
GAGGTATGGC ACGAATACAA TAAGCGTTGC AATATCGAAA ACAAAATTGA TGAACTCAAG
GTTGGCTTAG GCTTTGAAAA AATGAGCCAA GCAGAGATGG ATCGAAACAA AGCCTTTATG
TGGCTCAAAG TATTATCGTA TAACCTTCTC AACTGGTTTC GCTTGGCCTT ATTGGATGGC
AAAGACAGCC GTGCTGAAGT GCCCACTATC CGCCGTAAAA TACTGAATGT ACCTGGGAAC
ATTGTAGGCA ACAACCGTTA CCGCCATATA AAGTTAGCCC CTAATCCCTG GTTGCAAAAG
GCATTGAAGA ATGCTAAGGA AAAATTACAA GAATTCCTTT GCATACAGGC ATGGGTTGCC
GTAAGTTCAG GTTAA
 
Protein sequence
MMVSQFITTN QLETLTRQQR RDLERKYQKK LHSLQRLTSK SDLPISFDNT SVTAYGNFGI 
LEAFKQAIDF KGMLKGVSLK RHHNCKYSDT GLLDTIIDAL SLGLLRFSHM NALQTDPGYQ
KIKEVTQVPD ESTLRNFLSL ICEQEALNQL PLVNQEMLSL KAKSDQPREV WLDIDDSVLT
VFGKQEGSKV GYNPRYHGRP SYKVKVAFIS GTCELVNAGL YSGNVASNGQ FMEFLKETLE
ILAAQNILVK GIRIDKGFFD EDNFAYLEEQ GIEYICKAKL TSNMRKVIKY LDDQNQWQSL
SNHYAAAEIT IPLPKWSKAR RFVFIRETQE PKACGDQLNF DLKTFDYQVI ITSSDEHNPE
EVWHEYNKRC NIENKIDELK VGLGFEKMSQ AEMDRNKAFM WLKVLSYNLL NWFRLALLDG
KDSRAEVPTI RRKILNVPGN IVGNNRYRHI KLAPNPWLQK ALKNAKEKLQ EFLCIQAWVA
VSSG