Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_0862 |
Symbol | |
ID | 4958378 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | - |
Start bp | 917200 |
End bp | 918441 |
Gene Length | 1242 bp |
Protein Length | 413 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640180035 |
Product | transposase, IS4 family protein |
Protein accession | YP_001112225 |
Protein GI | 134298729 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3385] FOG: Transposase and inactivated derivatives |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGACAAGA ATACCAATAA ATCCACATAT AATCAACTAT TTCAAACAAT TTATAACGAA AAATTTTTAA GCAATGTCAA AGAATCAGAA GTCGATGCTT ACGCTAAAAA GTTAACCGTT ATCAAACTAA TTCAAATGAT TTCTTATGCA CAGTTAGAGC AACTTAAAGG TCTCCGCCAT ATTAGTAACA GCTTAAATGA TGATAATTTC AGCTCGGCAG TAGGTTTAGA TTCAATTAGT GCTTCACAGT TATCCCGTAA ATTGAGAGAT TTATCTCCTG AATTAACTCA GTCTCTATTT TCTGATATAG TCCATCAGTT TGGTACTGAA ATAGGTTTTA AATCAATAAG ACAAGAATTA GGTCGCATTT ATCTGATAGA CTCTTCAACA ATAAGCCTTT GTCTATCCCG ATACCGCTGG GCAGAGTTCA GAAAAACCAA AAGTGGAGTT AAATTACACC TCCGTATCCA GCTGCTTGAG CAAGGGGTTC TACCAGACAA AGCCATAATT AAACCAGCTA AGTCTGCTGA CAAAACACAA ATGGATGCCT TGGTTGTAGA AAAAGATGCC CTAAACGTCT TTGATCGTGG CTACTTGGAT TACAAGAGGT TTGACAATTA TTCTAATAAT GGTACCAGAT TCGTTAGCCG TTTAAAGAGT AACGCAATAG TTGAAACACT AGAAGAATTT CCAACAAACC AAGATAGCTT AATCAAGAAA GACCATAAAG TAATCCTAGG CAAAGACGGT ACAACCAAAA TGCAGAACCC CTTGAGACTA ATAGAAACAG AAGATACCGA GGGTAAGCCT GTAATTATCA TTACCAACGA CTTTGAGTTA AGTGCCGAGG AAATAAGCGA CATATACCGC TACCGCTGGC AGATAGAATT ATTCTTTAAG TGGATCAAAC AACATTTCTG TGTAAAACAT TTCTATGGTT TAAGCCAGCA GGCTGTGGAA AACCAATTGA TGATAGCACT GATTACCTAC TGTTTAATGA TGTTGCTTAA AAAGAAAACA GGTTACGAAG GCCCATTACT AAAAATTCAA ATGTTGCTTC ATACATGCCT TTATGTAGAC TTCACCAAGT TTGTACGAAA GCTCCACCAC AAGTCAGGCC AAAGTTCAAG AGGACGACGG TGTATAGACC ATGAAAAAGT CTACAACATT ACGTTAGTAC AGGTACTACA AGGTGAGGCA GAACACCTGG ATGATCTAAC TTACGACCCG ATAATAGCTT AG
|
Protein sequence | MDKNTNKSTY NQLFQTIYNE KFLSNVKESE VDAYAKKLTV IKLIQMISYA QLEQLKGLRH ISNSLNDDNF SSAVGLDSIS ASQLSRKLRD LSPELTQSLF SDIVHQFGTE IGFKSIRQEL GRIYLIDSST ISLCLSRYRW AEFRKTKSGV KLHLRIQLLE QGVLPDKAII KPAKSADKTQ MDALVVEKDA LNVFDRGYLD YKRFDNYSNN GTRFVSRLKS NAIVETLEEF PTNQDSLIKK DHKVILGKDG TTKMQNPLRL IETEDTEGKP VIIITNDFEL SAEEISDIYR YRWQIELFFK WIKQHFCVKH FYGLSQQAVE NQLMIALITY CLMMLLKKKT GYEGPLLKIQ MLLHTCLYVD FTKFVRKLHH KSGQSSRGRR CIDHEKVYNI TLVQVLQGEA EHLDDLTYDP IIA
|
| |