| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_0769 |
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| Symbol | alaS |
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| ID | 4955746 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 821755 |
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| End bp | 824391 |
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| Gene Length | 2637 bp |
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| Protein Length | 878 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640179942 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_001112132 |
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| Protein GI | 134298636 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0610904 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTTGACCG GAAAAGAAAT TAGAGAGAAA TATCTGCGTT TTTTTGAGCA GCGAGGCCAT
CAAATTTTGC CCAGTGCTTC ATTGATACCC CACAATGATC CCAGTATTCT CTGGACTGCT
GCGGGAATGG TCCCTTTTAA ACCCTTTTTT ACAGGACAGG CTGTGCCAGA ATATCAAAGG
GTAACAACTT GTCAGAAATG TATTCGAACA CCGGACATTG AATCTGTAGG ACGCACAGCC
AGGCACCATA CATTTTTTGA AATGTTGGGT AATTTCTCCT TTGGTGACTA TTTTAAAGAA
AGTATTATTC CCTGGGCTTG GGAATTTATT ACCAAAGAGC TTAACTTACC AAAGGAAAAA
CTTTGGATTA CTATCTATCA AGATGATGAT GAAGCCTTTG AAATATGGAA TAAGGTTGTT
GGGATACCGT CTGAACGGAT TGTTCGTCTA GGGAAAGACA CTAACTTCTG GGAAATTGGG
GTGGGTCCCT GTGGTCCCTG TTCCGAAATC TATGTTGACT TAGGAGAAGC CAGGGGCTGT
GGTTCCCCAG AATGTCAGGT TGGCTGCGAT TGTGACCGAT TCCTGGAAAT CTGGAACCTA
GTATTCATCC AGTTCTTCCG GGATGAAGAA GGCAATTATT CCCCTCTGGA GAATAAAGGT
ATTGATACAG GCATGGGTTT GGAGCGTGTG GCTTCCGTAC TACAGGGAGT GGCATCCAAC
TTTGATACCG ATATTTTCAG AGAAATCATG GACTTCACAG CCAACCTAGC AGGGCAAGAA
TATGGGCAGA AAGCAGATAT TGATTTAGCG TTAAAAGTTA TTGCTGACCA CTGCCGGGCC
GTTACCTTTG CAGTAAGTGA TGGGGCCCTG CCTGGCAATG AAGGCCGTGG CTATGTTATC
CGGCGTCTGT TGCGCCGGGC AGTTCGCTTT GGTAGAGTAT TAGGTGTGCG CGAACCCTTC
CTATATAAAG TTGCCCAGGC TGTTATTAAG CAAATGCAAG ATGCCTACCC CGAGCTTAAG
CAGAAGGCTG AACACGTATT GCGTGTAATT CGCACAGAGG AAGAACGCTT CTTGGAAACG
CTGGCAGCGG GTAGTGATAT TCTTTCTGCC TTAATTAACG AAGCAAAGGC CAGCGGTGCC
AGTGAAATCA CCGGAGATGA TGCATTTAAA TTATATGATA CCTTTGGTTT TCCTCTGGAA
CTAACTCAAG AAATTGCCGA GGAACAGGGA TTGGCAGTAG ATGTTGAGGT CTTTAATGCG
GCCATGGAAG AACAGCGCAA ACGGGCCCGT AGTGCCAGAC AAGAAACCGA GTACTTATCA
GAACGAGGTG TCCTATATAA GGCTTTACGG GAGGAACTGG GAGAAACCAG ATTTATTGGC
TACAGTGCTC TGGAAGCTGA CTCCAATATC ATGGCTCTTC TGAAGGATGG AATGCAGGAA
ATATCAGCGG TGGCAGGAGA GGAAGTGGAA ATTGTCCTAG ATGTAACTCC CTGCTATGCG
GAATCCGGTG GTCAGGTAGC GGATCACGCC ATCTTAAGGG GTCCGGACTT AGAAGTTGAA
ATAACATCCG TGAATAAACC CGTGGAGGGC TTAGTCATTC ACCGGGGCAA AGTACTTTCC
GGTATCATTA AGAGACACGA CTCTGTCAAA GCCATTGTTG ACCAACCTAG GCGTCAAGAT
ACAGCAAGAA ACCACTCTGC TACTCACCTG TTGCATAAAG CTCTCAAAGA GGTATTGGGT
GACCATGTAA ACCAAGCAGG TTCCTTAGTG GAGCCCGATC GCCTGCGCTT TGACTTTACC
CACTATGCAG CAGTAACTTC AGAAGAACTT CGCCGCATAG AAGAGATTGT TAATGAAGCT
GTACTGTCCA ATCTTTCCAT CGAAGTCTTT GAAACATCTC TTTCTAAGGC TAAGGAAATG
GGAGCTGCAG CACTCTTTGG TGAGAAGTAC GGCAAGCAGG TACGGGTTGT CAAGATGGGT
GACTTTAGCA TGGAACTATG CGGGGGCACT CATTTAACAT CCACTGCTGA GGTTGGACTG
TTTAAAATTT TCAATGAGAC CAGTGTAGGA GCCGGGTTAC GCCGTATTGA AGCTGTGACT
GGTACCGGTG TTTTAAAGTA TCTTAAGGCC AAAGAAGAAC AGCTAGAAGA AATTGCTTCT
GTTATTAAAA GCCCCATGCA TGAATTAGTT CGACGTTCAG AAGCTCTGGT TCAGCAAAAC
AAATCCCTTG AGCAGGAAAT TGAAGCACTT AGAAATAAAC TAGCCAAATC CGAGGTTCAA
GATATTCTAG GTAATATCAA GCGCGCTAAA GAAGTACCTG TATTGGCTTC AGTGGTAGCT
GCCCCGGATA TGGATAATTT ACGTGGGATG GTGGATATGT TACGAGACAA AATGGGCAGT
GGTGTTATCC TGCTGGGAAG TACAGCCGGA GAAAAGGTAA ATTTAGTGGC AGCAGTAACC
AAGGATCTTC ATGGACAGGG GCTTCATGCT GGTAATCTGG TAAAGGAAAT TGCTAAAATG
GTCGGCGGCG GTGGTGGCGG CAGGCCAGAT ATGGCCCAAG CAGGGGGTAA AAACCCGGAA
AAATTACAAG AAGCCATTGA TCAAGTTTGC CGCGTTGTGG AAGGACAAAT AAAGTAA
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| Protein sequence | MLTGKEIREK YLRFFEQRGH QILPSASLIP HNDPSILWTA AGMVPFKPFF TGQAVPEYQR
VTTCQKCIRT PDIESVGRTA RHHTFFEMLG NFSFGDYFKE SIIPWAWEFI TKELNLPKEK
LWITIYQDDD EAFEIWNKVV GIPSERIVRL GKDTNFWEIG VGPCGPCSEI YVDLGEARGC
GSPECQVGCD CDRFLEIWNL VFIQFFRDEE GNYSPLENKG IDTGMGLERV ASVLQGVASN
FDTDIFREIM DFTANLAGQE YGQKADIDLA LKVIADHCRA VTFAVSDGAL PGNEGRGYVI
RRLLRRAVRF GRVLGVREPF LYKVAQAVIK QMQDAYPELK QKAEHVLRVI RTEEERFLET
LAAGSDILSA LINEAKASGA SEITGDDAFK LYDTFGFPLE LTQEIAEEQG LAVDVEVFNA
AMEEQRKRAR SARQETEYLS ERGVLYKALR EELGETRFIG YSALEADSNI MALLKDGMQE
ISAVAGEEVE IVLDVTPCYA ESGGQVADHA ILRGPDLEVE ITSVNKPVEG LVIHRGKVLS
GIIKRHDSVK AIVDQPRRQD TARNHSATHL LHKALKEVLG DHVNQAGSLV EPDRLRFDFT
HYAAVTSEEL RRIEEIVNEA VLSNLSIEVF ETSLSKAKEM GAAALFGEKY GKQVRVVKMG
DFSMELCGGT HLTSTAEVGL FKIFNETSVG AGLRRIEAVT GTGVLKYLKA KEEQLEEIAS
VIKSPMHELV RRSEALVQQN KSLEQEIEAL RNKLAKSEVQ DILGNIKRAK EVPVLASVVA
APDMDNLRGM VDMLRDKMGS GVILLGSTAG EKVNLVAAVT KDLHGQGLHA GNLVKEIAKM
VGGGGGGRPD MAQAGGKNPE KLQEAIDQVC RVVEGQIK
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