| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_0766 |
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| Symbol | mnmA |
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| ID | 4955904 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 818785 |
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| End bp | 819888 |
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| Gene Length | 1104 bp |
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| Protein Length | 367 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640179939 |
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| Product | tRNA-specific 2-thiouridylase MnmA |
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| Protein accession | YP_001112129 |
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| Protein GI | 134298633 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0406399 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCAATCC AAAAAAGAGT GCTAGTGGCT ATGAGCGGCG GGGTTGACAG TTCAGTTACC
GCCGCCCTTT TACAACAGCA GGGTTATGAT ATAGTAGGTG TAACCATGCA GATATGGGAT
CCCGAGGTTA CAGTGGTGGG GGATGATTAT GTGGGTTGCT GCTCCCTCAC AGCTGTTGAT
GATGCACGCA GAGTAGCAAA TGTCCTAGGT ATCCCTTATT ATGTGCTTAA TTTCCGAGAA
CTTTTTACAG AAAAAGTAAT TCAGTACTTT GTGGATGAAT ATTTTCAAGG TCGTACACCC
AATCCTTGCA TTGCCTGCAA TCGTTTTATT AAATTTGAAG CTCTCTTGCA AAGGGCTCGT
CAGATGGGAT TTGATTATAT TGCCACCGGG CATTATGCAA GGTTAGGCTA TAGTGAGGAA
TTCCAACGTT ATACGGTAAA AAAGGCCCTA GATGATAAAA AAGATCAAAG CTATGTCCTT
TATGGTTTTA CACAGGACCA AATTGCCCAT ACACTCATGC CACTGGCCGA TTATACGAAG
GATCAGGTAC GTGGCATTGC AAAAGAAATG GGATTACCCA CCTATTCAAA ACCGGAAAGC
CAAGAAATTT GTTTTGTTCA TGATAACAAT TACCGTAATT TCTTGGATGA AAGATCCCAA
GGGGGGATTA AACCAGGACC CTTTAAGGAT TTGGCAGGGA ATGTTCTGGG GGAGCATAAA
GGAATACCCT TTTACACCAT TGGTCAACGT AGGGGGCTTG GCTTAGCAAC CGGAGAACGG
ACCTACGTTA TAGACATTGA CCCGGATAAT AATGTGGTAA CCGTGGGGTC GGAGGAGGCC
ATCTGGGGAA CGGAATTGAT TGCATCTGAA AACAATTTCA TCCTGTTTGA AAATCTTACT
GGGCCCCAGG AGTTGGAGGC ACAGGTTCGC TACAACAGTA AGCCATCTCC CGCAATTATC
GAGCCCTATG GGGAAGGTTT AGTTAAGGTA ACCTTTAAAT ATCCCCAGCG CGCTATTACA
CCCGGACAAG CCGTGGTTTA TTACCAAGGG GATTATTTAG TGGGTGGCGG AACCATTGAA
AAGACCATAA AACAAAAGAA TTAG
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| Protein sequence | MAIQKRVLVA MSGGVDSSVT AALLQQQGYD IVGVTMQIWD PEVTVVGDDY VGCCSLTAVD
DARRVANVLG IPYYVLNFRE LFTEKVIQYF VDEYFQGRTP NPCIACNRFI KFEALLQRAR
QMGFDYIATG HYARLGYSEE FQRYTVKKAL DDKKDQSYVL YGFTQDQIAH TLMPLADYTK
DQVRGIAKEM GLPTYSKPES QEICFVHDNN YRNFLDERSQ GGIKPGPFKD LAGNVLGEHK
GIPFYTIGQR RGLGLATGER TYVIDIDPDN NVVTVGSEEA IWGTELIASE NNFILFENLT
GPQELEAQVR YNSKPSPAII EPYGEGLVKV TFKYPQRAIT PGQAVVYYQG DYLVGGGTIE
KTIKQKN
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