| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_0742 |
|---|
| Symbol | |
|---|
| ID | 4955902 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | - |
|---|
| Start bp | 795663 |
|---|
| End bp | 796331 |
|---|
| Gene Length | 669 bp |
|---|
| Protein Length | 222 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640179916 |
|---|
| Product | polar amino acid ABC transporter, inner membrane subunit |
|---|
| Protein accession | YP_001112106 |
|---|
| Protein GI | 134298610 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
|---|
| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGACA TATATGGAAT ATTCACAGAG AATTTTCTTG CCTTTATGGA AGCAACTATC
GTTACACTGA AATTAACTTC TGTTTCGCTG TTACTTGCCA TGATCATCGG CCTTGTATTT
GCTTTTTTTA AAATTTCCAG AAATTATTTT TTACAAAACA TCGCTAATCT ATATATTACC
CTAGTTCGTG GTACACCTTT GGTCGTTCAG CTAATGTTTC TCTACTTTGG TATCATCAAA
CTGGTTGTAT TACCGGCCTT TTGGGCAGGA TCTTTGGCCC TGGCCATCCA TGCGGGGGCC
TATATTGCGG AAATATTTCG CGGGGCCATT CAGTCAATTA ATCAAGGTCA AATGGAAGCA
GCCCGCTCCC TAGGCATGAG CTACCCCTTA TCAATGCGCC GTATTATCTT ACCCCAGGCC
TTTCGCAGGG CCATTCCACC CTTAGGCAAT CAATTTATTA TTGGATTAAA GGATTCTTCT
CTGGTGGCCT ATTTAGGTGT CCCGGAAATA TATGGTACAG CACTGTATGC CCAGGCTGAA
AATTTTCAGC CCTTTGAAAC TTATTTAGTA GCTGGTCTTT ATTATTTAGT TCTAGTAATT
ATTTTTAGCT TCTTAGTTAA TAAATTAGAA GCAAAATTAA ATGTGGAGCA GAATGGAGGT
AATGCCTAG
|
|---|
| Protein sequence | MTDIYGIFTE NFLAFMEATI VTLKLTSVSL LLAMIIGLVF AFFKISRNYF LQNIANLYIT
LVRGTPLVVQ LMFLYFGIIK LVVLPAFWAG SLALAIHAGA YIAEIFRGAI QSINQGQMEA
ARSLGMSYPL SMRRIILPQA FRRAIPPLGN QFIIGLKDSS LVAYLGVPEI YGTALYAQAE
NFQPFETYLV AGLYYLVLVI IFSFLVNKLE AKLNVEQNGG NA
|
|---|
| |