| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_0728 |
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| Symbol | |
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| ID | 4955922 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 782204 |
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| End bp | 782869 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640179902 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001112092 |
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| Protein GI | 134298596 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000362636 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGCTTT TACAGATTTG GAAAGATGCT TTCCCAATAT TAATGATGGG TCTAAAACTG
ACTATTCAGT TGACTTCTTT AGCAGTATTT TTTGGCTGTA TTATAGGGTT ATTTGTTGGG
CTGGGTAAAA TGAGCCGGAT CAAGTTGATT AAGATTCCTG CTATCACATA TATTGAATTT
TTCCGTGGTT CGCCTTTACT GGTGCAATTA TTTTTAATTT ATTTTGGTCT ACCCCAAATT
CTTGGACATC CGGTTGATCG GTTTTGGTCT GCTGTGGCGG TCCTTAGCTT AAACAGTGGT
GCTTACTGTG CTGAAATATT CCGTGCAGGT ATCCAGTCCA TTGAGAAAGG CCAAATGGAA
GCCGCCCGGT CATTGGGTAT GACCCATATA CAAGCCATGA GGTATGTTAT TCTACCCCAA
GCATTTAAGA GAGTTATTCC TCCACTGGGC AATGAATTTA TTGCCATGAT GAAAGACACC
TCGTTGGTTT CGGTCATTGG CATGGCAGAA CTTGCCCGGA GTGGTCAATT ATATATTTCG
ACCACCTATA AAGCCTTTCA GATATGGTTC CTAGTGGCCA TTTTCTATAT TGTGATGACT
CTGTTTATAT CCGAGTTCTT TGTCAACCGC ATGGAAAGGA GGTTGCAGGC CGGTGATCAT
AGCTAA
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| Protein sequence | MELLQIWKDA FPILMMGLKL TIQLTSLAVF FGCIIGLFVG LGKMSRIKLI KIPAITYIEF
FRGSPLLVQL FLIYFGLPQI LGHPVDRFWS AVAVLSLNSG AYCAEIFRAG IQSIEKGQME
AARSLGMTHI QAMRYVILPQ AFKRVIPPLG NEFIAMMKDT SLVSVIGMAE LARSGQLYIS
TTYKAFQIWF LVAIFYIVMT LFISEFFVNR MERRLQAGDH S
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