Gene Dred_0723 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0723 
Symbol 
ID4957321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp776888 
End bp778342 
Gene Length1455 bp 
Protein Length484 aa 
Translation table11 
GC content48% 
IMG OID640179897 
Productglycine dehydrogenase subunit 2 
Protein accessionYP_001112087 
Protein GI134298591 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1003] Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0355451 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGAAA AATTAATATT TGAACTGGGT TCACCCGGTC GTCAGGGTGT CCTGTTTCCG 
GCCAATGATG TTCCAGAGAT TCCCCCCCAT GAATTGTTGC CAAGGGATTT AATAAGGGAA
CAAGAGGTAC CGCTGCCGGA GGTCAGTGAA GGGGATGCTG TACGACATTT TGTCAGGCTA
TCCAGAATGA ACTTTGGAGT GGATGTGGGG TTTTATCCTC TGGGTTCCTG CACCATGAAA
TACAATCCCA AAGTGGCAGA GGATGCAGCA GGGCTAAGTG GCTTTGCCAA TATTCACCCC
TATCAGCCCG ATGAAATTAG CCAGGGGGCA CTGCAACTGA TGTATGAAAC CCAGCAGGAT
CTTGCTGAAA TCACCGGTAT GGATGCCTTT ACCCTACAGC CGGCTGCTGG GGCCCAGGGT
GAATTAACTG GGATGTTGAT TATTAAGGCC TACCTGGAAA GCAAGGGAGA GACCGGGCGG
AACAAGGTCA TTGTTCCGGA TTCGGCTCAC GGTACCAACC CAGCCACAGC GGCCCTTTGT
GGTTTTAAAG TGGTGGAAGT AAAATCGGAT CAACGAGGTG GTGTTGATCT CGCAGCTTTA
AAGCAATTGT TGGGGCCGGA TGTGGCGGCT CTCATGCTGA CGAACCCAAG CACCTTAGGC
TTGTTTGAAG ATAATATTAC AGAAATTGCT GCACTGGTAC ACCAGGCCGG AGGACTATTA
TATTACGACG GTGCAAACCT GAATGCTATT ATGGGGTATG CCCGTCCTGG CGATATGGGT
TTCGATGTGG TTCACCTGAA TCTACATAAA ACCTTTGGCA CACCCCATGG TGGTGGAGGC
CCAGGCTCTG GGCCCGTAGG TGTAAAGGCT GAATTGGCAC CGTTCCTTCC TAAACCTGTG
ATTATTCAAA GAGAAGGCAA CTACCTGCCG GATTATCATC GTCCCCAGTC CATTGGTCGA
GTTAAAGCCT TTTTTGCAAA TTTTAGTGTT ATTGTTAAGG CCTATACCTA TTTGCGGTCT
TTGGGCGGTA AGGGGTTAAA AGAGGTTTCA GAACACGCAG TACTAAATGC AAACTATCTA
ATGAAACAGC TTTCGGACCA TTTTCGGGTT CCCTATCAAA GGACTTGTAT GCATGAGTTT
GTGGTTTCCC CACCTGAGGA TATGAAGGAG CAGGGGATTA AAACCCTGGA TATTGCTAAA
AGGCTTCTGG ATTATGGTTA TCACCCACCT ACGGTTTACT TTCCTTTAAT TGTGGAAGAA
GCTCTGATGT TTGAACCCAC GGAAACGGAA AGCAAAGAAA CTCTGGATGA ATTTGCTCAT
AATTTAATTA AGGTATTGGC AGAGGCCAGA GAAAACCCGG ATAAGTTAAG AAATGCCCCT
TACACCACAC CGATACGGAG GTTGGATGAA GTAATGGCTG CTCGCAAGCC CCTAGTGGGT
TGGTTTCCGG AATAA
 
Protein sequence
MTEKLIFELG SPGRQGVLFP ANDVPEIPPH ELLPRDLIRE QEVPLPEVSE GDAVRHFVRL 
SRMNFGVDVG FYPLGSCTMK YNPKVAEDAA GLSGFANIHP YQPDEISQGA LQLMYETQQD
LAEITGMDAF TLQPAAGAQG ELTGMLIIKA YLESKGETGR NKVIVPDSAH GTNPATAALC
GFKVVEVKSD QRGGVDLAAL KQLLGPDVAA LMLTNPSTLG LFEDNITEIA ALVHQAGGLL
YYDGANLNAI MGYARPGDMG FDVVHLNLHK TFGTPHGGGG PGSGPVGVKA ELAPFLPKPV
IIQREGNYLP DYHRPQSIGR VKAFFANFSV IVKAYTYLRS LGGKGLKEVS EHAVLNANYL
MKQLSDHFRV PYQRTCMHEF VVSPPEDMKE QGIKTLDIAK RLLDYGYHPP TVYFPLIVEE
ALMFEPTETE SKETLDEFAH NLIKVLAEAR ENPDKLRNAP YTTPIRRLDE VMAARKPLVG
WFPE