Gene Dred_0718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0718 
SymbolileS 
ID4957249 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp770239 
End bp773034 
Gene Length2796 bp 
Protein Length931 aa 
Translation table11 
GC content46% 
IMG OID640179892 
Productisoleucyl-tRNA synthetase 
Protein accessionYP_001112082 
Protein GI134298586 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0060] Isoleucyl-tRNA synthetase 
TIGRFAM ID[TIGR00392] isoleucyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00194665 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGATTACA GTAAAACCTT AAATTTACCC CAAACACAAT TTCCCATGAG AGGTAATTTG 
CCCCAGAGGG AACCGGAAAC ACAAAAGTAC TGGCAAGAAA TTGACCTGTA TAAAAAGGTG
CAGGAAAAAA ACAAAGGCAA AACAAAGTTT ATATTACATG ATGGACCTCC CTATGCCAAT
GGACACATTC ACCTGGGCCA TACCCTTAAC AAAGTATTAA AGGATATAAT TGTCAAATAT
CGTTCCATGA GTGGTTATGA TGCCCCCTAT GTACCTGGTT GGGATACCCA CGGTTTACCC
ATTGAGCAGC AGGCCATTAA ACAACTGGGT ATTAACCGTC ACCAAGTTAA TCCGGTGGAA
TTTAGGGCTA AATGCAAAGA TTATGCCCTG AAATGGGCCA ATACCCAAAG TGAGGAATTC
CAGCGTTTGG GTGTCCGGGG AGACTGGGAA AACCCCTATT ACACTTTGTT ACCCCAATAT
GAAGCTACTC AAATTCGAGT CTTTGGTGAA ATGGCCAAGA AAGGCTATAT TTATAAGGGC
CTGAAGCCTG TATATTGGTG TGCCAGCTGT GAAACTGCTC TGGCCGAAGC CGAAGTGGAA
TATGCTGATA AAACCTCTCC GTCTATTTAT GTAAAATTCC CTGTTAAAGA TGGCAAGGGC
GTTTTACCCC AGGATGCTGC AGTGGTTATT TGGACCACCA CTCCCTGGAC ATTGCCTGCT
AACGTAGCTA TCAGTGTTCA TCCTGAATTT GAATATGTAC TGGCTGCTGT ACAGAACCAG
AAGATTGTAG TGGCCAAGGA ACTGCTGGAA TCCTTTAAAC AGGCCGTAGG TGCTGAAGAA
GCAGAAATCC TAGCGACCTA TCAAGGAGAG CAACTGGAGC GGGTAGTTTG CCAACATCCC
TTTATTGATG AGCGCGAGTC GCTGGTAATT TTGGGTGAAC ACGTAACCTT AGATGCCGGT
ACCGGCGCTG TGCATACGGC TCCCGGACAT GGTGAGGAAG ACTTTATGGT TGGTAAAAAA
TATGAACTGC CGGTGCTGGC TCCCATAGAT AACCGGGGTA GGTTTACCTC TGAGGGAGGC
AAGTTTCAGG GACAGTTTAT TATGGACGCC AACAAGACTA TTATTGAAGA ATTAAAAGAA
CGGGATGCTT TAATGGGGCA TGTTAGCATT AAACACCAGT ACCCCCATTG CTGGCGCTGC
AAGCAGCCCA TTTTCTTCCG GGCCACTGAA CAGTGGTTTG CCTCGGTGGA CGGTTTCCGA
CAGGAAGCTT TGCAGGCTAT CCGTAATGTA AAATGGGTAC CATCCTGGGG TGAAGATCGT
ATTTACAATA TGGTAGAAGG CCGTGGTGAC TGGTGCGTAT CCCGTCAACG CACCTGGGGT
GTACCTATTC CTATTTTTTA TTGCAATGAT TGTGGTAAAG AAATTATCAC GGAGGAAACC
ATTTCTCATA TTGAAAAGTT GTTCAGGGAG CATGGGTCTG ATATCTGGTT TGCCAAGGAA
GCTAATGAAT TGGTGCCGGC CAGTCTGACT TGTCCTCACT GTGGTAAGGG TAAGGATTTC
CGCAAAGAAA CTGATACCAT GGATGTTTGG TTTGACTCTG GCTCCAGTCA CCTGGCTGTG
TTAAATCAGC CGGAGCTTTG GCCGGAACAG CAACGGCCTG CCGACCTTTA TCTGGAGGGC
AGTGACCAGC ATAGGGGTTG GTTTAATTCC TCTTTGTCCA CCTCAGTGGC CGTCACAGGT
AAGCCGCCCT ATAAAACTGT GTTGACCCAT GGTTTCACAG TGGATGAGAA GGGACGTAAA
ATGTCTAAAT CCCTTGGTAA TGTGGTGGAT CCTTTAAAAA TTTGCAGTCA AATGGGTGCG
GATATTCTGC GACTGTGGGT TTCTTCTGCT GATTACCGAG CAGATCTGGC TTTATCCCAG
AATATTTTAA AACAGATGAC CGAGTCTTAC CGTAAGATTA GAAATACAGC TAGGTTTCTG
CTGGGTAACC TATATGACTT TGACCCGGTG AAAGACAAAG TGGCCTATGA TAAGCTGCCG
GAACTGGACC GTGTGGCCCT GATGGAGTTG CACAAGTTAA TTAAACAAGT TTTGGCTGCC
TATGAAAATT ATGAGTTCCA TATTGTTTAC CACGCTGTAC ACAATTACTG CGTAGTAGAC
CTCAGTGCTT TCTACTTAGA TATTATTAAG GACCGTCTCT ACACTGCAGT TCCAGGCTCG
CTGGAACGTC GGGCTGCTCA GACTGTTCTT TATGAGGCAC TGGATGCCTT GGTTCGCCTG
TTGACACCAG TACTTGCCTT TACCACCGAG GAAATTTACA AATATATGCC GGTGGTAGGA
GACCGTTTGG CCAGTGTACA AATGCTGGAT ATGCCGGAAG TGAATGTTGA ATATATGGAT
GTAGAGTTAG AGAAGAAGTG GGATAAAATT CATGAAATCC GCAAAGAGGT ACTGAAGGCA
CTGGAAGTAG CTCGTAAGAA CAAGGTGATT GGTAATGCAT TGGAGGCAAA AGTAGACCTT
TATGTTGCCG GGGATGTGGA AGAAGTTCTT AAACCAATGG CAGCAGAATT AACTACTCTG
TTCATTGTTT CCAAGGTGAA CCTGCATGGG CTGGCGGCAG CTCCCGCAGA TGCCGTAAAA
GCGGAAGAGT TGGAATTGGC TCTTCAAGTG GCTACTGCTG AAGGTGGTAA GTGTGAACGC
TGTTGGATGT ACCACGAAGA AGTAGGCAAC GATGCCGAAC ACGCAACCCT CTGCCCCCGT
TGTGCAACGG TGGTAAAAGA ACATCATACT GCATAG
 
Protein sequence
MDYSKTLNLP QTQFPMRGNL PQREPETQKY WQEIDLYKKV QEKNKGKTKF ILHDGPPYAN 
GHIHLGHTLN KVLKDIIVKY RSMSGYDAPY VPGWDTHGLP IEQQAIKQLG INRHQVNPVE
FRAKCKDYAL KWANTQSEEF QRLGVRGDWE NPYYTLLPQY EATQIRVFGE MAKKGYIYKG
LKPVYWCASC ETALAEAEVE YADKTSPSIY VKFPVKDGKG VLPQDAAVVI WTTTPWTLPA
NVAISVHPEF EYVLAAVQNQ KIVVAKELLE SFKQAVGAEE AEILATYQGE QLERVVCQHP
FIDERESLVI LGEHVTLDAG TGAVHTAPGH GEEDFMVGKK YELPVLAPID NRGRFTSEGG
KFQGQFIMDA NKTIIEELKE RDALMGHVSI KHQYPHCWRC KQPIFFRATE QWFASVDGFR
QEALQAIRNV KWVPSWGEDR IYNMVEGRGD WCVSRQRTWG VPIPIFYCND CGKEIITEET
ISHIEKLFRE HGSDIWFAKE ANELVPASLT CPHCGKGKDF RKETDTMDVW FDSGSSHLAV
LNQPELWPEQ QRPADLYLEG SDQHRGWFNS SLSTSVAVTG KPPYKTVLTH GFTVDEKGRK
MSKSLGNVVD PLKICSQMGA DILRLWVSSA DYRADLALSQ NILKQMTESY RKIRNTARFL
LGNLYDFDPV KDKVAYDKLP ELDRVALMEL HKLIKQVLAA YENYEFHIVY HAVHNYCVVD
LSAFYLDIIK DRLYTAVPGS LERRAAQTVL YEALDALVRL LTPVLAFTTE EIYKYMPVVG
DRLASVQMLD MPEVNVEYMD VELEKKWDKI HEIRKEVLKA LEVARKNKVI GNALEAKVDL
YVAGDVEEVL KPMAAELTTL FIVSKVNLHG LAAAPADAVK AEELELALQV ATAEGGKCER
CWMYHEEVGN DAEHATLCPR CATVVKEHHT A