Gene Dred_0708 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0708 
Symbol 
ID4957058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp762546 
End bp763907 
Gene Length1362 bp 
Protein Length453 aa 
Translation table11 
GC content43% 
IMG OID640179882 
Productmulti-sensor signal transduction histidine kinase 
Protein accessionYP_001112072 
Protein GI134298576 
COG category[T] Signal transduction mechanisms 
COG ID[COG5002] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTTAAAG GTATAAGGCA GCGTACTATT GGTAGTTATG CTAGCCTTTT CTTTATCTTT 
GTTTGTCTGT CTGTTCTCTT TTATCTTAAC ATAATCAATA TCCTTACTGT ATTGCTGGGG
GCCTTTTGGG CCACAGTGTT TATGGCCTGG CTAACCAACC GACGGTTAAT TACTCCGGTA
GAACAAATTA CTTCCGTGGC CCAGGAAATG GCAGGGGGAT TTTTGGATAC GGAGATTCGG
GTGGAAGGTG AAGAAGAACT GGATGACCTG GCCTGGAGTA TTAACTACAT GGCCCGGGAA
CTTAGAAAAA ACCTCATTGT TATTACAGAG GAACGTAACC GTGCCAGGGC CATATTAAAC
AGTATGGCGG ACGGTGTTAT TGCCCTTGAT AAATACGGGC AAGTGATACT TATTAACCCG
GTTGTGGAGG AGATATTTAA AATTAAAGAG ACCAATTGGC TTGGTAACAA GATAATTAAA
GTGATCCGTA ATCATGAGTT AGAAGAATTA TTTATTAGGG CCTTGCACAG TATGCAGCCG
GTTATGAACA GTGAGTTACA AGTACTGACA CCACAGCCCA GATTATTTAA CATTCATGTT
ACACCTCTTA AAGGAAATAA TGATGAGAAG ATTGGTGTGG TGGGACTGAT AACAGATGTG
ACCGAGAGGC GTAAGCTGGA AAGGATGAGG ACAGAATTTG TGGCAAATGT TTCTCATGAA
TTAAGAACTC CCCTTACATC CATTAACGGT TTTGTGGAAA CCTTGTTAGA TGGCGCCATT
GAAGAACCTA TCATTGCCCG AAATTTTCTG GAGATTATCA GTGCAGAAGG AAAGCGTTTG
GCAAATATTA TCGATGACCT GTTGAAGCTG TCCCGTCTGG AAGATCGGCG TACCAAATTG
AATAAACAGC CTGTGGATTT AGCTGAAGTT ATTGGCAATA CTATCACCAT GTTTGAGGGG
CGGGCTTTGG AAAAGAACAT CCAAATAACA ACGGAGATAT CACCGAAACT ACCTTTGGTA
CCCGGTGATC AAGGTTTTTT ATCCCAGGTT ATGATCAATT TGGTGGACAA CGCCATCAAG
TACACACTAA CTGGTGGGAC GGTTCATATA TCTGTTAAAT TTAACGAGCA CGAAGTAACA
GTGACTGTTT CCGATACAGG TATTGGCATT CCCATAGAGA GTATACCCAG GGTCTTTGAG
AGATTTTATC GGGTTGACAA GGCCAGAAGT AGGGAAATGG GGGGAACGGG TCTTGGACTG
TCCATCTGTA AACATATTAT GGAAGCTCAT GGCGGAAAGA TTCGTGTGGA GAGTGATTCT
TCAGGCAGTC AATTTTCTTT TTCCTTGCCC CTTAAGGAAT AA
 
Protein sequence
MLKGIRQRTI GSYASLFFIF VCLSVLFYLN IINILTVLLG AFWATVFMAW LTNRRLITPV 
EQITSVAQEM AGGFLDTEIR VEGEEELDDL AWSINYMARE LRKNLIVITE ERNRARAILN
SMADGVIALD KYGQVILINP VVEEIFKIKE TNWLGNKIIK VIRNHELEEL FIRALHSMQP
VMNSELQVLT PQPRLFNIHV TPLKGNNDEK IGVVGLITDV TERRKLERMR TEFVANVSHE
LRTPLTSING FVETLLDGAI EEPIIARNFL EIISAEGKRL ANIIDDLLKL SRLEDRRTKL
NKQPVDLAEV IGNTITMFEG RALEKNIQIT TEISPKLPLV PGDQGFLSQV MINLVDNAIK
YTLTGGTVHI SVKFNEHEVT VTVSDTGIGI PIESIPRVFE RFYRVDKARS REMGGTGLGL
SICKHIMEAH GGKIRVESDS SGSQFSFSLP LKE