Gene Dred_0678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0678 
Symbol 
ID4956686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp732976 
End bp734229 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content45% 
IMG OID640179852 
ProductUDP-N-acetylglucosamine 1-carboxyvinyltransferase 
Protein accessionYP_001112042 
Protein GI134298546 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0766] UDP-N-acetylglucosamine enolpyruvyl transferase 
TIGRFAM ID[TIGR01072] UDP-N-acetylglucosamine 1-carboxyvinyltransferase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.99727 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAGT TTGTAATTGT AGGAGGGAAC CGCCTAAAGG GGAGTATTAA AGCCAATGGA 
TCAAAAAATG CAACGTTACC AATTCTAGCA GCTACTTTAT TAACCGGCGG TGTAAGTACC
GTACATCAAG TACCCAGGCT AAGGGATGTT TTAGTCATGC AGGAATTATT AACCTACCTG
GGTGCAAGGG TAACCTTTGA GGGAAATACC ATGACGGTGG ATGGCTCCAA TGTGCAGCCC
CAGGAGATAT CAGAGGACCT AATGAGGAAG ATGCGAGCAT CGAATCTGGT TCTGGGTCCT
CTGTTGAGCC GGTTTGGTCA TGTTAAGATT TCGCACCCAG GAGGGTGCAA TATTGGCTCC
CGTCCGATGA ACCTTCACTA CAAGGGATTG AATGCCCTGG GCGCCACCAT TAAGGAAAAA
TTTGGCTATA TATTAGCGGA TACTAGTCAG TTAACTGGAA CAGTTATTCA CTTTGATGTA
CCCAGTGTTG GTGCCACTGA AAATATGATG ATGGCCGGGG TATTGGCGGA AGGAACCACA
GTTCTTAGAA ATGCAGCAAA GGAGCCTGAG ATTGTAGATT TACAGAATTT CTTAAATGCT
ATGGGTGCTA AAATTGTCGG TGCCGGTACA GATGTTATTC GAATTGAAGG GGTGAAAGAA
TTAGATTCTG TCACTCATAC CGTGATCCCA GATCGCATTG AAGCAGGAAC TCATATGATA
GCCGGAGCCA TTACCCAAGG GGATGTTACG GTAACCAATG TAATACCAGA GCATTTGGAT
CCCGTTATCT ATAAATTAAT GGAAGCGGGT GTGCAGGTGG ATGTGGGTGA CGATTGGGTG
CGTGTTCAGA GTACTGGCCA ACTAAAAGCT GTGGATATTA AAACCATGCC TTATCCGGGT
TTTCCGACGG ATATGCAGTC TCAGATGATG GCATTATTAA CGGTTGCCGA AGGAACCAGT
GTAATTACCG AGACGATATT TGAGAATCGC TTTAAACATG TGCCGGAATT CCGTAGAATG
GGGGCAGACA TCTATTTAGA GGGTCATACA GCGGTGGTAA AAGGGGTAAA ACGCTTAACT
GGAGCCTGTG TGGAGGCCAC AGATCTCAGG GCGGGGGCAG CCTTAATTCT AGCAGCCCTG
GCTGGGGAAG ATGGCACAGT ATTAAGCAAT ATTGAACATA TTGACCGGGG ATATGAAAGA
ATAGAAATGA AATATAATTC CCTGGGGGCA CGTATTATAA GAGTCAATAG TTAA
 
Protein sequence
MEKFVIVGGN RLKGSIKANG SKNATLPILA ATLLTGGVST VHQVPRLRDV LVMQELLTYL 
GARVTFEGNT MTVDGSNVQP QEISEDLMRK MRASNLVLGP LLSRFGHVKI SHPGGCNIGS
RPMNLHYKGL NALGATIKEK FGYILADTSQ LTGTVIHFDV PSVGATENMM MAGVLAEGTT
VLRNAAKEPE IVDLQNFLNA MGAKIVGAGT DVIRIEGVKE LDSVTHTVIP DRIEAGTHMI
AGAITQGDVT VTNVIPEHLD PVIYKLMEAG VQVDVGDDWV RVQSTGQLKA VDIKTMPYPG
FPTDMQSQMM ALLTVAEGTS VITETIFENR FKHVPEFRRM GADIYLEGHT AVVKGVKRLT
GACVEATDLR AGAALILAAL AGEDGTVLSN IEHIDRGYER IEMKYNSLGA RIIRVNS