Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_0673 |
Symbol | murD |
ID | 4956591 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | + |
Start bp | 726618 |
End bp | 727988 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640179847 |
Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase |
Protein accession | YP_001112037 |
Protein GI | 134298541 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAACTTTT TAGGTAAAAG AGTTTTAGTC GTAGGCGCTG GTCTTAGTGG CCAGGCAGTT TGTAAATTTT TGCAGGAGAA ACAGTCGGTG GTTACTCTTA CGGATACTAG AACCCGGGAG CAAATTGGGC AGGCTATCGT ACAACTGTCA GAATTAGGAA TAGAGCTAAT TTTAGGGGAA TATCCTTCAG TGGATAAGGG TCAATACGAT ATGTTGGTGA TGAGTCCTGG GGTACCTTTA ACAATTTTAC CAGTGGTTCA GGCAAAGAAA TTTGACATTC CTGTTCTCGG AGAACTGGAG CTGGCCTATC GCTTTGCTAA GGCACCCATT GTAGCTATCA CAGGCACCAA TGGTAAAACC ACCACAACAA CGCTAACAGG TCAATTGTTC CGAGATGCCG GTTTTAAAAC CTTGGTGGCA GGGAACATTG GATTACCTAT GGTCAGCGAA ATTGAAAACT ATCAGGTTGG GGATATTGTT GTAGCAGAGG TATCCAGCTT TCAATTGGAA ACCACAGAGT ATTTTGCACC CAAGGTGGCG GTAATGCTTA ACCTTACGCC GGACCATCTG GATCGTCATG GGTCAATGGA AGAATACATA AAGGCAAAAT CATGCATCTT TATCCATCAA AAGCCCTCGG ACTATGTCGT ATTAAATTAT GATGATTTAG CATTAAGAGA ATTGGCCAAA AGTTGTCCCT CACAAGTTAT ATTTTTCAGC CGTCAGCATA TCATAGAAAA AGGAAGTTTT ATCCAGAACG ATAAAATTAT GGTATCTGGT AAGGGTGGAC CGGAAGAAGT AATTGATGTT AATGCCTTAC GCATACCGGG TCCCCATAAC TTGGAGAACG CTCTGGCAGC CACCGCAGCG GCCTATACCC TGGGGCTCAG CCCCAGGGAT ATTGCTGGGA CCCTTGGTCG CTTTACTGGT GTTGCTCATC GCTTGGAATT TGTAGCTAAT ATCAATGGAG TGGAGTATGT CAATGATTCC AAGGGAACAA ACCCAGACGC GGCAATTAAG GCATTGGAAT CCTATGATGC ACCGATTATC TTAATTGCCG GAGGAAAAAA CAAAGGCATT TCCTTCAATG ATTTCGCCAA AAAGATTAAA GAAAAGGTAA GGGTTTTAAT TACCCTGGGC GTACATGGTT ATCAGATCGA GGAAGCAGCT AGGGAACAGG GGTTTACCAA TATTTACCCT GTAGAAGATT ATGCCCAAGC GGTGCAACTG GCCCGAAAAC AGGCAAAGCC AGGGGAAATC GTACTGCTTT CACCGGCTTG TACCAGTTGG GATATGTTCA AAAGTTTTGA AGAGCGGGGA GAATTGTTTA AAAAACTTGT GTTGGAGATG CAAAAGAACG AAAGTTTTTA G
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Protein sequence | MNFLGKRVLV VGAGLSGQAV CKFLQEKQSV VTLTDTRTRE QIGQAIVQLS ELGIELILGE YPSVDKGQYD MLVMSPGVPL TILPVVQAKK FDIPVLGELE LAYRFAKAPI VAITGTNGKT TTTTLTGQLF RDAGFKTLVA GNIGLPMVSE IENYQVGDIV VAEVSSFQLE TTEYFAPKVA VMLNLTPDHL DRHGSMEEYI KAKSCIFIHQ KPSDYVVLNY DDLALRELAK SCPSQVIFFS RQHIIEKGSF IQNDKIMVSG KGGPEEVIDV NALRIPGPHN LENALAATAA AYTLGLSPRD IAGTLGRFTG VAHRLEFVAN INGVEYVNDS KGTNPDAAIK ALESYDAPII LIAGGKNKGI SFNDFAKKIK EKVRVLITLG VHGYQIEEAA REQGFTNIYP VEDYAQAVQL ARKQAKPGEI VLLSPACTSW DMFKSFEERG ELFKKLVLEM QKNESF
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