Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_0641 |
Symbol | |
ID | 4955927 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | + |
Start bp | 690363 |
End bp | 691508 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640179816 |
Product | peptidase S1 and S6, chymotrypsin/Hap |
Protein accession | YP_001112006 |
Protein GI | 134298510 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCAAAT GGAGGAATAT AGCTGTCTGT ACCTTAATTA TTGCATTCCT GTCTGGAATC ATGTTTGCTG CGGGTTGTAC CTTAATTAAG GATATTAGCC CAAAGGAAAA TATAGCACAG CAGCAGGAAG GAGTAGCTAA CGCCGGTATG CCGGGAGTGG GACCGAATGC CATTGCAGAC ATAGTAGAAA AGGTTAGTCC GGCAGTTGTT AAAATTACGA CGGTGGTGGC GGTGAAAGGC TACATAGATA ACAACCCATT TCTAAATGAT CCGTTTTTTA GACAATTCTT TGGAGAAAAT GCGCAACCCA AGTATCAGAG TGGTTTAGGT TCTGGATTTA TTATTTCTAA GGATGGTTAT ATTTTGACCA ATGATCATGT TGTTGAAGGT GCTCAAAAAA TTAGTGTGCT AGTGAAAGGA TATAAAAAGC CCTATGAAGC AAAACTCATA GGAGCAGATC CTTCAATGGA TTTGGCAGTA TTAAAAATTG AGGGAAAGGA GTTCCCAACC TTACCACTGG GGGATTCAAA AAAAATACGG GTAGGCAATT GGGTGATAGC CATTGGGAGC CCCTTTGGGT TGGAAGACAC TGTTACCATT GGTGTCATTA GTGCTAAGGA ACGTCCTTTA GAAATCGACA ACCGTACCTT TGAACACCTA CTACAAACGG ATGCATCCAT CAACCCAGGT AACAGTGGGG GTCCCTTGCT CAATTTAAAT GGGGAAGTAA TTGGTATAAA TACTGCCATC AATGCCCAAG CCCAGGGTAT TGGTTTTGCG ATACCCACCA GCACCGTGAA AGAAATAATT GATGATTTGA TTCAGCAGGG AAAAGTGAAG AGACCATGGC TAGGTGTACA AATCCAGCCG GTAACCCAGG ATATTGCCAA TTTTCTTGGT TATGATGGTA CAACAGGAGC TGTCATCTAT GGAGTTGTAC CTGATGGACC AGCAGCTAAA GCCGGTATAC AAGAGGGTGA CATTGTCTTA AGCATTGATG ATACAAAGAT TGATGACCCG GATACATTAA TAAAAACCAT GCAGAAGAAG AAGGTAGGTA CCAAGGTGTC AATGAAAGTG TTCCGCAAGG GAAAGACCAT CCAAATCACT GTTCTTACAG ATGAAAGACC AGCAAATGTA AAATAA
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Protein sequence | MSKWRNIAVC TLIIAFLSGI MFAAGCTLIK DISPKENIAQ QQEGVANAGM PGVGPNAIAD IVEKVSPAVV KITTVVAVKG YIDNNPFLND PFFRQFFGEN AQPKYQSGLG SGFIISKDGY ILTNDHVVEG AQKISVLVKG YKKPYEAKLI GADPSMDLAV LKIEGKEFPT LPLGDSKKIR VGNWVIAIGS PFGLEDTVTI GVISAKERPL EIDNRTFEHL LQTDASINPG NSGGPLLNLN GEVIGINTAI NAQAQGIGFA IPTSTVKEII DDLIQQGKVK RPWLGVQIQP VTQDIANFLG YDGTTGAVIY GVVPDGPAAK AGIQEGDIVL SIDDTKIDDP DTLIKTMQKK KVGTKVSMKV FRKGKTIQIT VLTDERPANV K
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