| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_0630 |
|---|
| Symbol | |
|---|
| ID | 4955619 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | + |
|---|
| Start bp | 675872 |
|---|
| End bp | 676570 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640179805 |
|---|
| Product | two component transcriptional regulator |
|---|
| Protein accession | YP_001111995 |
|---|
| Protein GI | 134298499 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAACG GAACGATATT GATTGCAGAT GATGATCATA GAATTGTTAA AATAGTTTCT
CATAGTCTGG AACAGGAGGG GTACAGGGTA ATAACTGCTA AGGACGGGGA ACAAGCTGTT
CAATTAGCCA CCACCATGAA GCCAGATATT GTTATTATGG ATATCATGAT GCCTAAACTG
GACGGGTTAG AGGCTTCCCA GAAAATTAAG ATGAAAGTCG ATGTTCCTAT CATCATATTG
TCTGCCAAAG ATGATGTTGT TGACAAAATT GTTGGGTTTA AAATGGGAGT GGATGATTAC
CAAACAAAAC CCTTTAGTCC CGCGGAATTG GCCCTAAGGG TAAAAGCAGT TCTAAGAAGA
AGCAAAGCTG TACCGGAAAA GAAGGGCAAG GATGTACTGG ATTACCAAAA TTTTTATATA
GAATATTCTA CCCGTCTTGT CCGAATATGG GGGAAGGAAG TTACGCTTAC CGCAAAGGAG
TTTGACATGC TTTGGCTGAT GGCCTCCCAT CCCAACCAAA TCTTCTCCCG CCTCCAATTA
TTAGAACAAA TTTGGGAGAG TCATTTTGAA GGGGATGAGG ATACCGTAAC AGTTCATATT
AGAAGGCTAA GGAGAAAAAT AGAAAGGGAT GCTGCTAAGC CAGAGTTGAT TAAAACTGTT
TGGGGAGTTG GTTATAAATT TGAGGCGCCC AAGGAATAA
|
|---|
| Protein sequence | MNNGTILIAD DDHRIVKIVS HSLEQEGYRV ITAKDGEQAV QLATTMKPDI VIMDIMMPKL
DGLEASQKIK MKVDVPIIIL SAKDDVVDKI VGFKMGVDDY QTKPFSPAEL ALRVKAVLRR
SKAVPEKKGK DVLDYQNFYI EYSTRLVRIW GKEVTLTAKE FDMLWLMASH PNQIFSRLQL
LEQIWESHFE GDEDTVTVHI RRLRRKIERD AAKPELIKTV WGVGYKFEAP KE
|
|---|
| |