Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_0625 |
Symbol | |
ID | 4958464 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | + |
Start bp | 671325 |
End bp | 672728 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640179800 |
Product | transposase, IS4 family protein |
Protein accession | YP_001111990 |
Protein GI | 134298494 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000561511 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAGA TAAGAAACAA GAAAATCAAA ACCAAAAACA GAGACGATGA TAGGCTCACT ATCTTTGAAA TTGAACAAGG TGACGAAGAG CTAACCACCC ATTCGGGCTT AGCTCTTATC GGAGCCTTAC TGACTAATAC CAAGATAAAA ACACGACTGA ACAATACAAT GTCTGCTGAA CAAAAGAAAC CCCATATTTC TAATGGAAGT GTTGGTATTG CCTACATTGG CTTGTTATGC CAAGGCAAGA GTGATTTTGA CCACATTGAA CCCTTTCGAG AAGATAATTT CTTTGCAATC TCGTTAAACA TCAAAGAGAC ACCGTCAAGC CCAACCCTTC GCCAACGATT AGATATGGTT GCTAAAGATA AGCAATGGAA TAATATCCTG TTGGAAGAAT CTGCGGGGCT AATCAAAAAA ACAAATGCAC CACTAACCCC AGTGTACCTG GGTCAAGAAA ATAGAGCTTA TCTTCCACTA GATATTGATG TGTCTCCCTT TGATAACTCC AACACCAAAA AAGAAGGGGT CTCCCGCACC TACAAAGGCA CCGATGGTTA CGCTCCCATC TTTGCATATC TAGCAAAGGA AGGTTATTGC GTAAATACTG AGCTACGCCA AGGGAGTGAA CATTGCCAAA AGAACACCTC AGAATTCGTT GCCGAAAGCA TTCGCTATGC CAGAAAAATT ACCCAGTTGC CTTTGCTTTT AAGGATGGAC TCAGGCAATG ACAGCGCTAG TAATATTGAA ATTTGCTTAA ATGATGATAC TAAGGCTGAT TTCATTATTA AGCGAAACCT TCGCAAAGAA ACCCCTGAAG GGTGGCTACT ATTGGCAAAG AACAATAAAG ATATTTACTG CCAGGAACGT GAAGGTAAAA AAGTCTACTA TGGTTCCATG ATGAAATACA AAAAGGAGCT GAAAAGAGAA ATCAGGGTAG TTTACAAAAT TACCGAAAGA ACCTTTGGTA AAGATGGCCA GATATTTCTC GTACCCCAGG TGGAGGCAGA AACCTATTGG ACCTCATTGC CAGACCCTCC ACATGTAATC GAAAGACTAT ACCACGAACA TGGCACCAGT GAGCAGTTTC ACAGCGAACT TAAGACAGAC CTGGATTTAG AAAGACTGCC CTCTGGCAAA TTTGACACTA ACAACCTAAT ACTACATTTT GGAGTAGTGG CCTACAATCT GTTGCGCATG ATAGGACAAT CAACAACTAG AATGCAGCAT GTGCCCTTGC GAAAGCAGGC AGAACGCCGT AGGATTAGGA CGGTGATTCA GAACTTAATC ACGTTGGCAT CACGGTTAGT TTCACATGCA AGAAAGAAGA AATTACGATT TGGAAAGCAC AGTCCCTGGT TTGAAACATT TAAACAAGCT TACTCTGTGT GTTTAGCAAG ATAG
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Protein sequence | MKKIRNKKIK TKNRDDDRLT IFEIEQGDEE LTTHSGLALI GALLTNTKIK TRLNNTMSAE QKKPHISNGS VGIAYIGLLC QGKSDFDHIE PFREDNFFAI SLNIKETPSS PTLRQRLDMV AKDKQWNNIL LEESAGLIKK TNAPLTPVYL GQENRAYLPL DIDVSPFDNS NTKKEGVSRT YKGTDGYAPI FAYLAKEGYC VNTELRQGSE HCQKNTSEFV AESIRYARKI TQLPLLLRMD SGNDSASNIE ICLNDDTKAD FIIKRNLRKE TPEGWLLLAK NNKDIYCQER EGKKVYYGSM MKYKKELKRE IRVVYKITER TFGKDGQIFL VPQVEAETYW TSLPDPPHVI ERLYHEHGTS EQFHSELKTD LDLERLPSGK FDTNNLILHF GVVAYNLLRM IGQSTTRMQH VPLRKQAERR RIRTVIQNLI TLASRLVSHA RKKKLRFGKH SPWFETFKQA YSVCLAR
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