Gene Dred_0625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0625 
Symbol 
ID4958464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp671325 
End bp672728 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content41% 
IMG OID640179800 
Producttransposase, IS4 family protein 
Protein accessionYP_001111990 
Protein GI134298494 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000561511 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGA TAAGAAACAA GAAAATCAAA ACCAAAAACA GAGACGATGA TAGGCTCACT 
ATCTTTGAAA TTGAACAAGG TGACGAAGAG CTAACCACCC ATTCGGGCTT AGCTCTTATC
GGAGCCTTAC TGACTAATAC CAAGATAAAA ACACGACTGA ACAATACAAT GTCTGCTGAA
CAAAAGAAAC CCCATATTTC TAATGGAAGT GTTGGTATTG CCTACATTGG CTTGTTATGC
CAAGGCAAGA GTGATTTTGA CCACATTGAA CCCTTTCGAG AAGATAATTT CTTTGCAATC
TCGTTAAACA TCAAAGAGAC ACCGTCAAGC CCAACCCTTC GCCAACGATT AGATATGGTT
GCTAAAGATA AGCAATGGAA TAATATCCTG TTGGAAGAAT CTGCGGGGCT AATCAAAAAA
ACAAATGCAC CACTAACCCC AGTGTACCTG GGTCAAGAAA ATAGAGCTTA TCTTCCACTA
GATATTGATG TGTCTCCCTT TGATAACTCC AACACCAAAA AAGAAGGGGT CTCCCGCACC
TACAAAGGCA CCGATGGTTA CGCTCCCATC TTTGCATATC TAGCAAAGGA AGGTTATTGC
GTAAATACTG AGCTACGCCA AGGGAGTGAA CATTGCCAAA AGAACACCTC AGAATTCGTT
GCCGAAAGCA TTCGCTATGC CAGAAAAATT ACCCAGTTGC CTTTGCTTTT AAGGATGGAC
TCAGGCAATG ACAGCGCTAG TAATATTGAA ATTTGCTTAA ATGATGATAC TAAGGCTGAT
TTCATTATTA AGCGAAACCT TCGCAAAGAA ACCCCTGAAG GGTGGCTACT ATTGGCAAAG
AACAATAAAG ATATTTACTG CCAGGAACGT GAAGGTAAAA AAGTCTACTA TGGTTCCATG
ATGAAATACA AAAAGGAGCT GAAAAGAGAA ATCAGGGTAG TTTACAAAAT TACCGAAAGA
ACCTTTGGTA AAGATGGCCA GATATTTCTC GTACCCCAGG TGGAGGCAGA AACCTATTGG
ACCTCATTGC CAGACCCTCC ACATGTAATC GAAAGACTAT ACCACGAACA TGGCACCAGT
GAGCAGTTTC ACAGCGAACT TAAGACAGAC CTGGATTTAG AAAGACTGCC CTCTGGCAAA
TTTGACACTA ACAACCTAAT ACTACATTTT GGAGTAGTGG CCTACAATCT GTTGCGCATG
ATAGGACAAT CAACAACTAG AATGCAGCAT GTGCCCTTGC GAAAGCAGGC AGAACGCCGT
AGGATTAGGA CGGTGATTCA GAACTTAATC ACGTTGGCAT CACGGTTAGT TTCACATGCA
AGAAAGAAGA AATTACGATT TGGAAAGCAC AGTCCCTGGT TTGAAACATT TAAACAAGCT
TACTCTGTGT GTTTAGCAAG ATAG
 
Protein sequence
MKKIRNKKIK TKNRDDDRLT IFEIEQGDEE LTTHSGLALI GALLTNTKIK TRLNNTMSAE 
QKKPHISNGS VGIAYIGLLC QGKSDFDHIE PFREDNFFAI SLNIKETPSS PTLRQRLDMV
AKDKQWNNIL LEESAGLIKK TNAPLTPVYL GQENRAYLPL DIDVSPFDNS NTKKEGVSRT
YKGTDGYAPI FAYLAKEGYC VNTELRQGSE HCQKNTSEFV AESIRYARKI TQLPLLLRMD
SGNDSASNIE ICLNDDTKAD FIIKRNLRKE TPEGWLLLAK NNKDIYCQER EGKKVYYGSM
MKYKKELKRE IRVVYKITER TFGKDGQIFL VPQVEAETYW TSLPDPPHVI ERLYHEHGTS
EQFHSELKTD LDLERLPSGK FDTNNLILHF GVVAYNLLRM IGQSTTRMQH VPLRKQAERR
RIRTVIQNLI TLASRLVSHA RKKKLRFGKH SPWFETFKQA YSVCLAR