| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_0576 |
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| Symbol | caiC |
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| ID | 4958096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 618019 |
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| End bp | 619569 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640179753 |
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| Product | putative crotonobetaine/carnitine-CoA ligase |
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| Protein accession | YP_001111943 |
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| Protein GI | 134298447 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATATAG TAGGAAACAA GACTTTGCGA GATATGTGGG ATGAGCTGGC CCGGATTTAT
AGCGAAAAAA CTGTCTTGAT CTTTGAGGAC CGCAACGGCA GTATTAGTGA ATATACCTAT
TCACAGCTTA ATGAAGAAAT TAATAAGACG GCTAATCTTT TTCTCGATTT AGGAATACAA
AAGGATGAAA AGGTTGCTAT TCAGCTCCAT AACTGCCCTG AATTTTTGAT GTGTTGGTTT
GGGCTTGCAA AAATCGGAGC TGTTTTGGTT CCTTTAAACA CACACTACAC ACAAGAAGAA
TGTGGATATA TTCTTAAAAA GTGTGATGTT GCTACCGTAG TTATTGAAGA AGAGTTTTTA
CCTATTTATG ATCGAAGTAG ACCAAACAAA GATATTAGTA TTAAAAATAT ATTGTTGGCA
AGAAGCGAAA AACAAATTCC CGGTACCATA AACTTTAAGG AAAATAAGGG AAAACAGCCC
GGGGAATTGA AGGAGTTAAG ACCTTTAAGC AGTGACGATG TTGCGGAAAT CTTGTTTACA
TCGGGTACAA CATCAAAGCC AAAGGGCGTT GTTCTTACCC ATTGTAATTT GTTATATGCA
GGTATTTTTA CTTCTTGGCA GGGTGCGTTC AGGTATGATG ACCGTTATTT AAGTATTGAA
CCTGCTTTTC ATGTTGATTT TCAGCTTACT GCCTTAATGC CCGTCCTTAC TGTTGGTGCC
ACTATGATTG CAGTGGAAAA ATACAGCGCC AGTAGGTTTT GGAAGCAAAT CTGCAAATAT
AAGGCAACCA TCACACAGGC TATGCCAATG ATGCTTCGAA CAATGATGCT ACAGCCTCAA
CAGGAATGGG AAAAAGACCA TTGTATTCGG CAATTTTTCT TTTTTCTTGC TCTTACTAAT
CAGGAAAAGG ATGCTTTTGA AGAGCGCTTT AATGTGCGAT TGTTTAATTC CTACGGCTTA
ACCGAGTCTC TCGTTGGAGT AATCGGCGAT TTTCCATTCG GAGAAAGAAA ATGGCCTTCT
ATAGGCAGAC CGGGATTATC TTATGAGGCA AAAATTGTTG ATGAGGAAGG CAATGAGGTT
CCTCCTAATA CTATCGGGGA GATCTGTATA AAAGGCGTAC CCGGCAGAAC TATTATGAAG
GAATATTATA AAGATGCGGA AGCAACAGCA AAGACCTTGA AGCCCGGGGG ATGGATGCAT
ACAGGGGATA AGGGCTATGT TGATGAGTCA GGCTGGTTTT ATTTTGTTGA TCGTAAAGTA
AATATGATTA AAAGATCGGG AGAAAATGTT TCTGCTACTG AAATTGAAAA TATCCTCATG
TGTCATCCCA AAATTGCTGA AGCAGCGGTA ATAGGGGTGC CTGATCCTAT TCGTGACCAG
GCAGTAAAGG CCTTTATTGT GTTTAAAGAG GGTGAAGAGC TTAGTACTGA GGAGATCTTG
GAATATTGCA GAGGTCGTAT GGCTAAATTC AAAGTGCCGT CCTTTATAGA AATAAGGACC
TCTTTTCCCA GAACCTGCAC ATGTAAGGTA CAAAAAAAAA TGCTGTCATA A
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| Protein sequence | MDIVGNKTLR DMWDELARIY SEKTVLIFED RNGSISEYTY SQLNEEINKT ANLFLDLGIQ
KDEKVAIQLH NCPEFLMCWF GLAKIGAVLV PLNTHYTQEE CGYILKKCDV ATVVIEEEFL
PIYDRSRPNK DISIKNILLA RSEKQIPGTI NFKENKGKQP GELKELRPLS SDDVAEILFT
SGTTSKPKGV VLTHCNLLYA GIFTSWQGAF RYDDRYLSIE PAFHVDFQLT ALMPVLTVGA
TMIAVEKYSA SRFWKQICKY KATITQAMPM MLRTMMLQPQ QEWEKDHCIR QFFFFLALTN
QEKDAFEERF NVRLFNSYGL TESLVGVIGD FPFGERKWPS IGRPGLSYEA KIVDEEGNEV
PPNTIGEICI KGVPGRTIMK EYYKDAEATA KTLKPGGWMH TGDKGYVDES GWFYFVDRKV
NMIKRSGENV SATEIENILM CHPKIAEAAV IGVPDPIRDQ AVKAFIVFKE GEELSTEEIL
EYCRGRMAKF KVPSFIEIRT SFPRTCTCKV QKKMLS
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