Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_0534 |
Symbol | |
ID | 4957546 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | + |
Start bp | 577859 |
End bp | 579094 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640179713 |
Product | transposase, IS4 family protein |
Protein accession | YP_001111903 |
Protein GI | 134298407 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3666] Transposase and inactivated derivatives |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGTATCTTC TACAACCAAA CCTATTTTCC TTCGAAGAAC TACTAAAATT TGAACCAGAG ACAAAATTGC AAAAGGTTCT TTCAGTTTTG GATCTATCTC CTGCCCTTAA TGTGGTTAAA AGGGCGGTTC TCGGTCCAAA GGGTCACTGT GTCGGTAACA TGATTCGTGC ATTAGTGGCA AAACAATTAG AACAAATACC TACAGTCGCT GCATTAGTAA AAAGACTATC TAATGATATA AGGTTTCGGT TCCAATGTGG TTTTTCGCTT AGTAAACCAA TTCCAAGTGA ATCCACCTTT AGTCGTCTGA TACAAAAACT CGCAGCAACT GATGAGACAA ACAAAACAGA AAGTGTCATG AAGCAGATTT TTGATAACCT AGTTAAAAGT GCTAAAGATA TGGGATTAAT AGATTCGAAT TGTGTTGCAA TTGACTCTAG CAAAATAGAT GCGTATGAAA AATCCAAGCC TAAAAAGGAT TTGCAGGGTG ACAAAACTGC AAACTGGGGT GCTAAAAGGG ATACTCATGG TAACCAAATA TCCTGGTTTG GATATAAAGC TCACGTTGCA GTTGATTGCC ATAGTGAACT ACCAATTGCT ATTATGGTTA CACCTGCTAA TACCCATGAT GCTAAGATGG CAATACCTTT AATCGAATTA GTAAACAAGG CCTTGGAAGA CTCAAAAAAA CCTAAATACT ATACCATGGA TATGGGCTAT GACAGTAAAG ACATCTACTC TGTAGTAATG AACGACTTCA ATGCTCAAGC AATTATCCCC ATTAACTCCC GAGGCTCTAA GGACCATCCT GAAGGCTGTG ACTTTGATGG AACCCCTATA TGCTCAATGG GGCAAAGAAT GGTGTTCTGG GGAAGTGATG CAAAGGCTGG AACCAATAAA TATAGGTGCC CGCATGTAAT GGGCAAATGT GATTGCCCCT ACGGGTCTGC CTGGTGCTCA CCATCTTCCT ACGGTTTAGT TGTAAAGACT AAAGTTAAAG ACGATCCAAG AATGAACTGT ATACCAGCCC GTGGTACTAA GAACTGGCAA AGCCTTTATA ACAAAAGAAC TTCCGTAGAA AGATGTTTTG GTCGATTAAA ACAACACTTG GGTGCTAACA GTATTCGTAC CAGAGGATTG GAAAAAGTTA CTCTCCACAT AACATTGAGT TGTATTGCAC TACTGGCTGG TAGTATTGCA GTAGCAAAGA CCAAAAGAAT TGAGCAGGCA GCTTAA
|
Protein sequence | MYLLQPNLFS FEELLKFEPE TKLQKVLSVL DLSPALNVVK RAVLGPKGHC VGNMIRALVA KQLEQIPTVA ALVKRLSNDI RFRFQCGFSL SKPIPSESTF SRLIQKLAAT DETNKTESVM KQIFDNLVKS AKDMGLIDSN CVAIDSSKID AYEKSKPKKD LQGDKTANWG AKRDTHGNQI SWFGYKAHVA VDCHSELPIA IMVTPANTHD AKMAIPLIEL VNKALEDSKK PKYYTMDMGY DSKDIYSVVM NDFNAQAIIP INSRGSKDHP EGCDFDGTPI CSMGQRMVFW GSDAKAGTNK YRCPHVMGKC DCPYGSAWCS PSSYGLVVKT KVKDDPRMNC IPARGTKNWQ SLYNKRTSVE RCFGRLKQHL GANSIRTRGL EKVTLHITLS CIALLAGSIA VAKTKRIEQA A
|
| |