Gene Dred_0534 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0534 
Symbol 
ID4957546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp577859 
End bp579094 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content40% 
IMG OID640179713 
Producttransposase, IS4 family protein 
Protein accessionYP_001111903 
Protein GI134298407 
COG category[L] Replication, recombination and repair 
COG ID[COG3666] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTATCTTC TACAACCAAA CCTATTTTCC TTCGAAGAAC TACTAAAATT TGAACCAGAG 
ACAAAATTGC AAAAGGTTCT TTCAGTTTTG GATCTATCTC CTGCCCTTAA TGTGGTTAAA
AGGGCGGTTC TCGGTCCAAA GGGTCACTGT GTCGGTAACA TGATTCGTGC ATTAGTGGCA
AAACAATTAG AACAAATACC TACAGTCGCT GCATTAGTAA AAAGACTATC TAATGATATA
AGGTTTCGGT TCCAATGTGG TTTTTCGCTT AGTAAACCAA TTCCAAGTGA ATCCACCTTT
AGTCGTCTGA TACAAAAACT CGCAGCAACT GATGAGACAA ACAAAACAGA AAGTGTCATG
AAGCAGATTT TTGATAACCT AGTTAAAAGT GCTAAAGATA TGGGATTAAT AGATTCGAAT
TGTGTTGCAA TTGACTCTAG CAAAATAGAT GCGTATGAAA AATCCAAGCC TAAAAAGGAT
TTGCAGGGTG ACAAAACTGC AAACTGGGGT GCTAAAAGGG ATACTCATGG TAACCAAATA
TCCTGGTTTG GATATAAAGC TCACGTTGCA GTTGATTGCC ATAGTGAACT ACCAATTGCT
ATTATGGTTA CACCTGCTAA TACCCATGAT GCTAAGATGG CAATACCTTT AATCGAATTA
GTAAACAAGG CCTTGGAAGA CTCAAAAAAA CCTAAATACT ATACCATGGA TATGGGCTAT
GACAGTAAAG ACATCTACTC TGTAGTAATG AACGACTTCA ATGCTCAAGC AATTATCCCC
ATTAACTCCC GAGGCTCTAA GGACCATCCT GAAGGCTGTG ACTTTGATGG AACCCCTATA
TGCTCAATGG GGCAAAGAAT GGTGTTCTGG GGAAGTGATG CAAAGGCTGG AACCAATAAA
TATAGGTGCC CGCATGTAAT GGGCAAATGT GATTGCCCCT ACGGGTCTGC CTGGTGCTCA
CCATCTTCCT ACGGTTTAGT TGTAAAGACT AAAGTTAAAG ACGATCCAAG AATGAACTGT
ATACCAGCCC GTGGTACTAA GAACTGGCAA AGCCTTTATA ACAAAAGAAC TTCCGTAGAA
AGATGTTTTG GTCGATTAAA ACAACACTTG GGTGCTAACA GTATTCGTAC CAGAGGATTG
GAAAAAGTTA CTCTCCACAT AACATTGAGT TGTATTGCAC TACTGGCTGG TAGTATTGCA
GTAGCAAAGA CCAAAAGAAT TGAGCAGGCA GCTTAA
 
Protein sequence
MYLLQPNLFS FEELLKFEPE TKLQKVLSVL DLSPALNVVK RAVLGPKGHC VGNMIRALVA 
KQLEQIPTVA ALVKRLSNDI RFRFQCGFSL SKPIPSESTF SRLIQKLAAT DETNKTESVM
KQIFDNLVKS AKDMGLIDSN CVAIDSSKID AYEKSKPKKD LQGDKTANWG AKRDTHGNQI
SWFGYKAHVA VDCHSELPIA IMVTPANTHD AKMAIPLIEL VNKALEDSKK PKYYTMDMGY
DSKDIYSVVM NDFNAQAIIP INSRGSKDHP EGCDFDGTPI CSMGQRMVFW GSDAKAGTNK
YRCPHVMGKC DCPYGSAWCS PSSYGLVVKT KVKDDPRMNC IPARGTKNWQ SLYNKRTSVE
RCFGRLKQHL GANSIRTRGL EKVTLHITLS CIALLAGSIA VAKTKRIEQA A