Gene Dred_0516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0516 
Symbol 
ID4957366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp557926 
End bp558957 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content36% 
IMG OID640179696 
Productradical SAM domain-containing protein 
Protein accessionYP_001111886 
Protein GI134298390 
COG category[R] General function prediction only 
COG ID[COG0535] Predicted Fe-S oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGAGA GCAGCAAGCT AGAAAATTTA TTTGTTGAAA TCACAAATAA ATGTGCACTC 
AAATGCAGAC ATTGTTCTTC TGAAGCCTCC CCGAGTGGTC AAGAACATAT TTCAATAAAC
CAGTTAGTGG CCTTAATAGA TCAAGCATAT CAAATGGGTT TAAAAAGTTT TACCATTTCT
GGTGGAGAGC CATTTTTACA CCCAGACATT AAAGAGTTAC TCAAATATTT AAAGAAGAAA
GACATATCAA CTTGTATTTA TACCAGCGGA GTTATACAAG AAGGAAATGA TTTAATTCCA
TTTCCGGACA GATTAGTAGA TTTTCTTAGA AATGGTCTAG TCCATAATCT AATTTTTAGT
ATTCAAGGAG CAGATTCGCT TACTCACGAT AATATAACCG GTATCAGTGG TAGTCAAATA
ATAACACTGG AATCAATAGC TAAAGTTAAG AAAAATCTAC TACCATTTGA AATTCACTTT
GTACCAATGA AGTTAAACTA TTTGGAGATA CCACAGGTTA TTAATTTGGC AGAGCAGCTA
GGAGCTAACC AAGTAAGCTT GTTAAGGCTG GTTCCTCAAG GAAGATGCCT GGACTCCAAA
GAATATTTGT TGTTAGACCG TAAAACTGCC GAAGAATTTG AATCTTATGT GAAAGAATTA
ACGGCTCAAC CCCAGGGGAT TAGTATTAGA CTGGGGACAC CATTCAATTG TGTCACAGAA
TCCGAAAAAG TCTGCAGTGC ATCTTTAAAC AAGCTTTTAA TTTCCGCTAG TGGTGAAGTA
TTTCCATGTG AAGCATTCAA GTTCTTAAAG GGTTTAAGAA ATAACATTCA TAATACAGAG
TTAAGAATGA TCTGGAAAAA TGATATTTTA TTAAATCACC TAAGAAATAT ATCATTAAAG
GATATCAAGG TTTGTGGAGA TTGTCCTTCT ATTGAGAGCT GCAGAGGTGG GTGCCCTGGT
CAGAGGATGC TATATAATGG AGATATAGCA GAAGGGCCAG AACCGTATTG TAAATATATT
TTAGCGACCT GA
 
Protein sequence
MNESSKLENL FVEITNKCAL KCRHCSSEAS PSGQEHISIN QLVALIDQAY QMGLKSFTIS 
GGEPFLHPDI KELLKYLKKK DISTCIYTSG VIQEGNDLIP FPDRLVDFLR NGLVHNLIFS
IQGADSLTHD NITGISGSQI ITLESIAKVK KNLLPFEIHF VPMKLNYLEI PQVINLAEQL
GANQVSLLRL VPQGRCLDSK EYLLLDRKTA EEFESYVKEL TAQPQGISIR LGTPFNCVTE
SEKVCSASLN KLLISASGEV FPCEAFKFLK GLRNNIHNTE LRMIWKNDIL LNHLRNISLK
DIKVCGDCPS IESCRGGCPG QRMLYNGDIA EGPEPYCKYI LAT