Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_0476 |
Symbol | |
ID | 4956761 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | + |
Start bp | 519659 |
End bp | 521113 |
Gene Length | 1455 bp |
Protein Length | 484 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640179647 |
Product | transposase, IS4 family protein |
Protein accession | YP_001111847 |
Protein GI | 134298351 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00134081 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGGTAT CACAATTTAT TACCACAAAT CAACTTGAAA CTTTGACCCG TCAACAACGA CGTGATTTGG AACGTAAATA TCAGAAGAAA TTACATTCTC TTCAACGCCT GACTAGCAAA AGTGATCTTC CGATTAGCTT TGACAATACT TCTGTAACTG CTTATGGAAA TTTTGGCATA CTAGAGGCGT TTAAGCAAGC CATTGATTTC AAGGGTATGC TTAAAGGGGT TTCCCTTAAG CGACATCATA ACTGTAAATA CTCTGATACA GGGTTGTTAG ATACAATCAT TGATGCCCTT TCCTTGGGAT TATTACGGTT TTCTCATATG AATGCTCTGC AAACTGACCC TGGATACCAG AAAATTAAAG AAGTAACACA AGTGCCTGAC GAAAGCACTT TGCGGAACTT TCTATCTCTT ATCTGTGAGC AGGAGGCATT AAACCAATTG CCTCTGGTGA ATCAGGAAAT GCTGTCCTTA AAGGCCAAAT CCGATCAGCC CCGTGAAGTC TGGCTAGATA TTGATGACAG TGTCCTCACT GTTTTTGGGA AACAGGAAGG ATCAAAAGTC GGTTACAATC CTCGGTACCA CGGGAGGCCT TCCTACAAGG TAAAGGTAGC ATTTATCTCT GGAACTTGCG AACTAGTCAA TGCCGGGTTA TATAGTGGGA ACGTCGCCAG CAATGGCCAA TTTATGGAAT TCCTTAAAGA GACATTAGAG ATCTTAGCTG CCCAGAATAT CCTCGTAAAA GGTATCCGCA TAGATAAAGG TTTCTTTGAT GAGGATAACT TTGCCTACCT GGAAGAACAG GGCATCGAGT ATATTTGTAA GGCTAAACTC ACCAGTAATA TGAGAAAGGT CATTAAATAC CTTGATGACC AGAACCAGTG GCAGTCTTTG AGCAACCATT ATGCTGCAGC AGAAATCACC ATTCCATTAC CTAAATGGTC CAAAGCCCGC AGGTTTGTAT TTATCCGTGA AACTCAAGAA CCTAAGGCAT GCGGCGATCA ACTTAACTTT GACCTGAAGA CATTCGACTA CCAGGTGATA ATTACTTCTA GTGACGAGCA CAACCCAGAG GAGGTATGGC ACGAATACAA TAAGCGTTGC AATATCGAAA ACAAAATTGA TGAACTCAAG GTTGGCTTAG GCTTTGAAAA AATGAGCCAA GCAGAGATGG ATCGAAACAA AGCCTTTATG TGGCTCAAAG TATTATCGTA TAACCTTCTC AACTGGTTTC GCTTGGCCTT ATTGGATGGC AAAGACAGCC GTGCTGAAGT GCCCACTATC CGCCGTAAAA TACTGAATGT ACCTGGGAAC ATTGTAGGCA ACAACCGTTA CCGCCATATA AAGTTAGCCC CTAATCCCTG GCTGCAAAAG GCATTGAAGA ATGCTAAGGA AAAATTACAA GAATTCCTTT GCATACAGGC ATGGGTTGCC GTAAGTTCAG GTTAA
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Protein sequence | MMVSQFITTN QLETLTRQQR RDLERKYQKK LHSLQRLTSK SDLPISFDNT SVTAYGNFGI LEAFKQAIDF KGMLKGVSLK RHHNCKYSDT GLLDTIIDAL SLGLLRFSHM NALQTDPGYQ KIKEVTQVPD ESTLRNFLSL ICEQEALNQL PLVNQEMLSL KAKSDQPREV WLDIDDSVLT VFGKQEGSKV GYNPRYHGRP SYKVKVAFIS GTCELVNAGL YSGNVASNGQ FMEFLKETLE ILAAQNILVK GIRIDKGFFD EDNFAYLEEQ GIEYICKAKL TSNMRKVIKY LDDQNQWQSL SNHYAAAEIT IPLPKWSKAR RFVFIRETQE PKACGDQLNF DLKTFDYQVI ITSSDEHNPE EVWHEYNKRC NIENKIDELK VGLGFEKMSQ AEMDRNKAFM WLKVLSYNLL NWFRLALLDG KDSRAEVPTI RRKILNVPGN IVGNNRYRHI KLAPNPWLQK ALKNAKEKLQ EFLCIQAWVA VSSG
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