| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_0474 |
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| Symbol | |
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| ID | 4956756 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 517295 |
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| End bp | 518353 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640179645 |
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| Product | isopentenyl pyrophosphate isomerase |
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| Protein accession | YP_001111845 |
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| Protein GI | 134298349 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases |
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| TIGRFAM ID | [TIGR02151] isopentenyl-diphosphate delta-isomerase, type 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.994842 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCGCTTAA ACCGAAAACT AGAACATATT CAATTTTCGC TTCAGCAAAA GAGTAGAGGA
GGTGCTACGG GTTTTGATGA TATAACTCTG TTACATAATT CTTTGCCCCA GTTAGATTGG
GGAGATATAG ATACGAGTTG TTATTTTCTT GGCAAAAAAT TGCACGTTCC TTTGCTGATT
AATGCCATGA CCGGCGGGCA CAGGGAGTTG GAGAGTATTA ATGGTAACTT AGCAAAGGCT
GCGGCTGCGG CAGGAGTAGC CCTGGCAGTG GGGTCCCAAA GGGCCGCGTT GGAAGATAAC
TCCACACGAT ATAGTTTCTC TGTGGTGAGG GAAGTGAACC CCCAGGGGGT TGTATTAGCA
AATTTAGGGG CGGATTGTTC TCTGCTAGAG GCCCGAACAG CCATTAAGAT GATTAATGCC
GATGGTATTC AATTGCACTT GAATGCACCC CAGGAATTGG CTATGGCGGA AGGAGACCGT
AAATTTAAGG GTATCCTGGA AAATATCCAG AGCCTTAGCC GTGACTTAGA TGTGCCTGTG
ATTGTAAAAG AAGTGGGCTT TGGTATGAGT CGTGAAAGCA TCCAGCGAAT AGGCGCTGCC
AGTGTACCAT ACATTGATGT GGGTGGCGCC GGAGGTACCG ATTTTGTGGC CATTGAGGAG
GCTAGGGCAG GCAGAAAGAC CTGGCTAAAA TGGGGCATTC CTACGGCAGT TAGTTTGCTG
GAAGGGCTTT CAATGAATCG GGCAAAGACC CAGCTTATTG CATCGGGCGG AATACGCAAT
GCCTTGGATA TTGTTAAGTC CCTGTCCCTG GGCTGCAGCC TGGTGGGTAT GGCCCGCCCC
CTATTAAGGG TATTAGTGGA GGGGTCCAGC GAAGAATTAA ACAGCTATTT GTCCAACATA
ATCGAAGATA TTCATCGTAT TATGCTGATG TTGGGGGCAC GAACCCTAGA GGATTTACAA
AGGGTTCCTC TAATTATCAG TGGTAATACC TATCATTGGT TGTGCTGCAG GGGGATTGAT
GTTGCTCCCT ATGCCAGGAG AGCAGGCACT AGTTACTAA
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| Protein sequence | MRLNRKLEHI QFSLQQKSRG GATGFDDITL LHNSLPQLDW GDIDTSCYFL GKKLHVPLLI
NAMTGGHREL ESINGNLAKA AAAAGVALAV GSQRAALEDN STRYSFSVVR EVNPQGVVLA
NLGADCSLLE ARTAIKMINA DGIQLHLNAP QELAMAEGDR KFKGILENIQ SLSRDLDVPV
IVKEVGFGMS RESIQRIGAA SVPYIDVGGA GGTDFVAIEE ARAGRKTWLK WGIPTAVSLL
EGLSMNRAKT QLIASGGIRN ALDIVKSLSL GCSLVGMARP LLRVLVEGSS EELNSYLSNI
IEDIHRIMLM LGARTLEDLQ RVPLIISGNT YHWLCCRGID VAPYARRAGT SY
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