Gene Dred_0458 details

Gene Information

• Locus tag: Dred_0458
• ID: 4956566
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Desulfotomaculum reducens MI-1
• Kingdom: Bacteria
• Replicon accession: NC_009253
• Strand: +
• Start bp: 501002
• End bp: 501586
• Gene Length: 585 bp
• Protein Length: 194 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 640179628
• Product: pro-sigma-E processing factor spoIIR
• Protein accession: YP_001111829
• Protein GI: 134298333
• TIGRFAM ID: [TIGR02837] stage II sporulation protein R

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGTGTT CTAGAAAATT TATTTATGCA ATTTGTATTT TAATAGGGCT AATTGTTTCT 
TCCTTTTGGT CTTACCGTAT TTATGTACAA CATGAATTTG CCAGTGAATT AATTCGGTTT 
CATGTAATTG CCAATAGCGA CAGTTTTCAA GATCAGAGCC TTAAGCTGCA TGTAAGGGAC 
GTTGTTGTGG AAGAAATGAA AAATAAATTT AGAAATACCA ATAGCCGGGA AGAAGCTGAA 
AAAATTGTTC TGAACAGTAT GGATGAAATC AAGGCACTTG CTCATAAACA GATTCAACGA 
GAGGGTAAGG ACTACCCGGT AAAGGTTATG ATGGGTGATT TTTATTTTCC CACCAAAAGT 
TATGGCAGTT TGACCTTACC GGCCGGTGAC TACCATGCAG TTCGGGTTAT TATCGGGGAA 
GGACAGGGTA AAAACTGGTG GTGCGTGCTT TTCCCCCCCT TGTGTTTTGT GGACAGTGTA 
GAGGACTTGG AGGAGAATGA AACTGCTAGG GGACTGAAAG TATTTGAAAA AGATAAAGTG 
GAGTTCCGAC TTAAATGTGT AGATGTTTTA AAAATGTTTA GTTAG 

 

Protein sequence

MKCSRKFIYA ICILIGLIVS SFWSYRIYVQ HEFASELIRF HVIANSDSFQ DQSLKLHVRD 
VVVEEMKNKF RNTNSREEAE KIVLNSMDEI KALAHKQIQR EGKDYPVKVM MGDFYFPTKS 
YGSLTLPAGD YHAVRVIIGE GQGKNWWCVL FPPLCFVDSV EDLEENETAR GLKVFEKDKV 
EFRLKCVDVL KMFS