| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_0453 |
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| Symbol | |
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| ID | 4956511 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 495362 |
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| End bp | 496225 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640179623 |
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| Product | secretion protein HlyD family protein |
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| Protein accession | YP_001111824 |
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| Protein GI | 134298328 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACAAGAA AAAAACCGAG AGCGCTTACG GCCCTTTTAC TGTTACTGGT ATTTCTGGTT
GGTTGTAACC AGTCAACGGA TGAAAACACA CAGGTACAGA AGGACGAAGT ACAAATGACA
GCCACTGCAC AAAAAACGCT AAAAGATAAG CAGGCTACAA TGGTCATAAG CGGAAAAATT
GAGGCTGTTC AGTCAGCCAA TCTGGTCAGT AAAGTAGCTG GCAAGGTTGC TGCAGTCCAT
GTGGACATCG GCAGTACGGT AAAGGTCGGC CAACTGCTGG TTAGCCTTGC CGCAGAAGAT
AAAGCCGCTG AAGTAGAAGA GTCCGCCACA TTGGTGGAAA AAGCCCAGGT GGAATATGAC
TTGGCCCTAA AGACCTATCA AAGGGGCAAA GAACTCTTGG CATCCCAGGC TATATCCCAA
GCGGATTACG ATAACCAGTA TGAAGGTCCC TATAAAAGGG CGGAGGTGGG ACTAAAATCC
GCCCAGGCTA CTTTAAAGAG GAAACAAATC TCCTATGAGG ATATGTTTAT CAAAGCCCCC
TTTGCAGGCG TTATTACTGC AAAGAACATT AATCCCGGAG AAATGGCGGG CACCCAAAAT
GCTCTCTTGT CTCTTGTAAA CCTGAGCCAG GTAGTTATTA AGGGAACTGT TGGTGAAAAG
GAAATCAATC AGTTAAAAAA CGGACAAGAG GTACAAGCAA AAGTACCAGC TATCCCGGGT
AAGACCTTTA CCGGTAAGAT TAGCAACATT GCTCTGGCTG CTGACTCCCA AACAAAGGCT
TATCCCATAA AAGTTCAACT GGACAACCCT GGTTATATTA TGAAACCCGG TATGTTTGCT
GAGATTGTTA TCAATAAAAA GTAG
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| Protein sequence | MTRKKPRALT ALLLLLVFLV GCNQSTDENT QVQKDEVQMT ATAQKTLKDK QATMVISGKI
EAVQSANLVS KVAGKVAAVH VDIGSTVKVG QLLVSLAAED KAAEVEESAT LVEKAQVEYD
LALKTYQRGK ELLASQAISQ ADYDNQYEGP YKRAEVGLKS AQATLKRKQI SYEDMFIKAP
FAGVITAKNI NPGEMAGTQN ALLSLVNLSQ VVIKGTVGEK EINQLKNGQE VQAKVPAIPG
KTFTGKISNI ALAADSQTKA YPIKVQLDNP GYIMKPGMFA EIVINKK
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