| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_0416 |
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| Symbol | |
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| ID | 4958654 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | - |
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| Start bp | 457301 |
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| End bp | 458041 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640179587 |
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| Product | regulatory proteins, IclR |
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| Protein accession | YP_001111788 |
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| Protein GI | 134298292 |
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| COG category | [K] Transcription |
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| COG ID | [COG1414] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000505949 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATAGCA TAGAAAAAGT TCTTTGGATT TTAAATAGAT TAGGTGAGGA ACCCTATGAA
ATGAATCTGA CTGCACTTGC CAATGAAATG AATACTGTAA AAAGTGGTGT ACACAAAACA
TTAGGTATTA TGATGAAACA AGGTTTCATT CTTCAAAACC CAGAAACCAA AAAGTACTCA
ATTGGCCCCA CTATGTATAG ACTTGGAAAT GTTTATAATA ACCGAGTAGG TATTTGGGAA
ATTGCAAAAC CCATTATCAT GCAAGTAGCA GAAGTTACAC ATGAAACGGT TTCAATAGGC
ATTAGAGAAG GGGATAATGC TTTTCTCGCC TATAAAATTG ATTCTCCACT GCCTGTTCGC
TATTTTGAGG ATATTGGTAC TCAATTTCCC ATGAATGCTA GTGCTGTAGG AAAAGTATTA
GCAGCGTACC ACGATACTGA AAGGGTAAAA GAACTATTAA AATCAAATAC ATTTAAAAAG
CATACGCCTA ACACAATAGT TAAACCTGAT GCAATTTTAC AAGAATACCA AAAGATTCGC
GAGCAAGGTT ATGCCATTAG CGATGAAGAG AGATTTTTGG AATCCTTTGG AATTGCAGTA
CCCATAATAA ATAGCAGTAA AGATGTATGG TCGTGTTTAT GTATTACAGG ACCAAAAGCA
CGCTTCACTC CAGATAAGGT TAATAATTGG GTTGAACTAT TGAAAAGCAA AGCCAATGAA
ATCTCAAGTG TATTAGCATA A
|
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| Protein sequence | MNSIEKVLWI LNRLGEEPYE MNLTALANEM NTVKSGVHKT LGIMMKQGFI LQNPETKKYS
IGPTMYRLGN VYNNRVGIWE IAKPIIMQVA EVTHETVSIG IREGDNAFLA YKIDSPLPVR
YFEDIGTQFP MNASAVGKVL AAYHDTERVK ELLKSNTFKK HTPNTIVKPD AILQEYQKIR
EQGYAISDEE RFLESFGIAV PIINSSKDVW SCLCITGPKA RFTPDKVNNW VELLKSKANE
ISSVLA
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