| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_0415 |
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| Symbol | |
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| ID | 4955734 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 456296 |
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| End bp | 457180 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640179586 |
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| Product | pyridoxal biosynthesis lyase PdxS |
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| Protein accession | YP_001111787 |
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| Protein GI | 134298291 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0214] Pyridoxine biosynthesis enzyme |
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| TIGRFAM ID | [TIGR00343] pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00249205 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCAAGAAC AGGGTACATG GACACTTAAA AAAGGACTGG CTGAAATGTT AAAAGGTGGA
GTTATTATGG ATGTAACAAC ACCGGAACAA GCTAGAATAG CAGAAAATGC CGGGGCTTGT
GCAGTAATGG CTTTAGAGAG AGTTCCTGCA GATATTAGAG CTGCAGGTGG AGTAGCTAGA
ATGGCAGATC CTACTGTAGT ATTACGAATT ATGGATGCTG TTACAATTCC TGTAATGGCT
AAGGCAAGAA TTGGTCATTT TGTGGAAGCA CAGATTTTAG AAGGTTTAGG AGTAGATTAT
ATTGACGAAA GTGAAGTTTT AACTCCTGCT GATGAATTAT TTCATATTAA TAAAAATACA
TTTAAGGTTC CCTTTGTATG TGGTTGCCGT AACTTAGGAG AAGCATTGCG TCGTATTGGC
GAAGGTGCTG CCATGATTAG AACTAAAGGA GAGCCAGGTA CTGGAAACGT GGTTGAGGCA
GTAAGACATT TTCGCCAAGT AAACAGTGAA ATTAAGAAAA TAATGAATTT ACCTGAAGAA
GAGTTAATGA CTGTTGCCAA AGAAATAGGT GCACCTTTTG AATTAGTAAA AGTAGTACAT
CAGACGGGTA AATTACCTGT GGTTAATTTT GCTGCGGGTG GAATTGCAAC TCCTGCGGAT
GCTGCGCTTA TGATGCAATT AGGTGTTGAT GGCGTATTTG TGGGTTCTGG CATATTTAAG
TCTGGAGACC CAATGAAAAG AGCTAAGGCT ATTGTAGCTG CTACAACCTA TTATAATGAT
CCCCAGGTTT TGGCTGAAGT GTCTAAGGAT TTAGGGGAAC CTATGGTAGG TATTGAGATT
CACAATATTA AAGCTGAAGA AAGAATGCAA GATAGAGGTT GGTAG
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| Protein sequence | MQEQGTWTLK KGLAEMLKGG VIMDVTTPEQ ARIAENAGAC AVMALERVPA DIRAAGGVAR
MADPTVVLRI MDAVTIPVMA KARIGHFVEA QILEGLGVDY IDESEVLTPA DELFHINKNT
FKVPFVCGCR NLGEALRRIG EGAAMIRTKG EPGTGNVVEA VRHFRQVNSE IKKIMNLPEE
ELMTVAKEIG APFELVKVVH QTGKLPVVNF AAGGIATPAD AALMMQLGVD GVFVGSGIFK
SGDPMKRAKA IVAATTYYND PQVLAEVSKD LGEPMVGIEI HNIKAEERMQ DRGW
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